Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL583856.2-201ENST00000606298 543 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AL121652.1-201ENST00000608851 448 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AL133445.2-201ENST00000611191 527 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 VN1R7P-201ENST00000619242 903 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 AC099506.2-201ENST00000623074 221 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 MTND4P9-201ENST00000507819 1346 ntBASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.65□□□□□ -1.83
SHROOM1Q2M3G4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 ANKRD36P1-201ENST00000344424 659 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 RNU1-140P-201ENST00000365040 165 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 MIR16-1-201ENST00000385271 89 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC096632.1-201ENST00000427395 310 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC092634.2-201ENST00000428146 1010 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AL139132.1-201ENST00000431587 344 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 ELOCP23-201ENST00000452014 332 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 ARPC3P2-201ENST00000457786 533 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC087897.1-201ENST00000550134 156 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 OR4T1P-201ENST00000554933 911 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 YWHAZP1-201ENST00000556286 722 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AL109653.1-201ENST00000603091 248 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC084824.4-201ENST00000620106 731 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 ZNF542P-204ENST00000482727 1305 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SHROOM1Q2M3G4 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 C1DP1-201ENST00000426049 402 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC140076.1-201ENST00000449897 361 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 MTATP6P14-201ENST00000455189 673 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 FCF1P6-201ENST00000456841 595 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 HMGB1P22-201ENST00000505315 124 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC093752.1-206ENST00000511823 336 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 SNORD59.2-201ENST00000516873 68 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 OR8K4P-201ENST00000534608 872 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC022069.1-201ENST00000582910 658 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AL445435.1-201ENST00000604232 665 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AL139022.2-201ENST00000606934 443 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC093732.2-201ENST00000607950 274 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AP005137.2-201ENST00000609238 400 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC091903.1-201ENST00000624322 454 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AC013437.2-201ENST00000639587 677 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AL645568.2-201ENST00000432815 1337 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 AL035425.3-201ENST00000564206 4996 ntBASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHROOM1Q2M3G4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 OR1S2-201ENST00000302592 978 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC073325.2-201ENST00000339545 159 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 RNU6-444P-201ENST00000383988 108 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 RNU6-549P-201ENST00000384433 107 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AL449283.1-202ENST00000418249 604 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 RPL21P32-201ENST00000419877 477 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 AC009237.2-201ENST00000421358 284 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 GLRXP1-201ENST00000423261 334 ntBASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.62□□□□□ -1.83
SHROOM1Q2M3G4 MTCYBP32-201ENST00000427945 1084 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms