Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC104454.1-201ENST00000421341 1401 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.35□□□□□ -1.87
SIX1Q15475 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX1Q15475 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
SIX1Q15475 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIX1Q15475 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
SIX1Q15475 MTCO1P14-201ENST00000441695 1559 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SIX1Q15475 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIX1Q15475 AL139811.1-201ENST00000424779 2299 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SIX1Q15475 Y_RNA.25-201ENST00000362528 102 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 RNU6-1243P-201ENST00000364028 107 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 MIR649-201ENST00000384843 97 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.34□□□□□ -1.87
SIX1Q15475 RSL24D1P4-201ENST00000400938 484 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX1Q15475 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX1Q15475 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX1Q15475 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX1Q15475 AC096632.1-201ENST00000427395 310 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SIX1Q15475 HMGN2P31-201ENST00000432430 273 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 HSPD1P21-201ENST00000436541 245 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX1Q15475 AL008629.1-201ENST00000438615 184 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 MTND3P1-201ENST00000441336 220 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX1Q15475 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX1Q15475 RPL7P18-201ENST00000478965 734 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX1Q15475 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.34□□□□□ -1.87
SIX1Q15475 MTND2P38-201ENST00000522536 667 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX1Q15475 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX1Q15475 HIGD1AP17-201ENST00000554576 276 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX1Q15475 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX1Q15475 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.34□□□□□ -1.87
SIX1Q15475 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
SIX1Q15475 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX1Q15475 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.34□□□□□ -1.87
SIX1Q15475 AC008751.2-201ENST00000597885 980 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AC068313.1-201ENST00000604028 1008 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AC025811.1-201ENST00000604312 472 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AC069200.1-201ENST00000609511 323 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AC079416.3-201ENST00000624479 549 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 AC120349.2-201ENST00000625002 298 ntBASIC3.34□□□□□ -1.87
SIX1Q15475 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.34□□□□□ -1.87
SIX1Q15475 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIX1Q15475 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.34□□□□□ -1.87
SIX1Q15475 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SIX1Q15475 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SIX1Q15475 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SIX1Q15475 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
SIX1Q15475 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIX1Q15475 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIX1Q15475 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIX1Q15475 RNU6-216P-201ENST00000363282 104 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 Y_RNA.311-201ENST00000365068 96 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 MIR23A-201ENST00000385245 73 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 RNU6-757P-201ENST00000410334 100 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 BX323014.1-201ENST00000412876 237 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 HSFY4P-201ENST00000415994 1181 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 RPS15AP40-201ENST00000419621 391 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.33□□□□□ -1.88
SIX1Q15475 FTH1P1-201ENST00000437933 532 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SIX1Q15475 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.33□□□□□ -1.88
SIX1Q15475 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 PRSS3P4-201ENST00000453323 162 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 SNRPGP5-201ENST00000456003 220 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 RN7SL75P-201ENST00000461926 281 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 MTND1P16-201ENST00000465177 898 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC087385.1-201ENST00000475062 312 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC013828.1-201ENST00000481845 158 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC068305.1-201ENST00000497406 726 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIX1Q15475 AC021146.8-201ENST00000507455 733 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIX1Q15475 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC016065.2-201ENST00000514530 444 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC125611.1-201ENST00000549563 229 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 MRPS36P5-201ENST00000551909 298 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AL389895.1-201ENST00000554127 252 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AL161713.1-201ENST00000555538 145 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC009712.1-201ENST00000564938 316 ntBASIC3.33□□□□□ -1.88
SIX1Q15475 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.33□□□□□ -1.88
SIX1Q15475 AC021171.1-201ENST00000603137 706 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms