Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 AL133215.3-201ENST00000609801 448 ntBASIC4.05□□□□□ -1.76
FOXF2Q12947 uc_338.5-201ENST00000611839 155 ntBASIC4.05□□□□□ -1.76
FOXF2Q12947 DISC2.1-201ENST00000612827 205 ntBASIC4.05□□□□□ -1.76
FOXF2Q12947 AC040896.1-201ENST00000613819 479 ntBASIC4.05□□□□□ -1.76
FOXF2Q12947 AL133173.2-201ENST00000614270 90 ntBASIC4.05□□□□□ -1.76
FOXF2Q12947 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXF2Q12947 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXF2Q12947 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXF2Q12947 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXF2Q12947 AL022322.2-201ENST00000624072 20397 ntBASIC4.05□□□□□ -1.76
FOXF2Q12947 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF2Q12947 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
FOXF2Q12947 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF2Q12947 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXF2Q12947 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXF2Q12947 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXF2Q12947 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
FOXF2Q12947 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
FOXF2Q12947 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 Y_RNA.144-201ENST00000363521 113 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 SNORA70.2-201ENST00000364506 135 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 RNA5SP509-201ENST00000364577 119 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 SNORA69-201ENST00000383895 132 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 MIR649-201ENST00000384843 97 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AC068050.1-201ENST00000394891 380 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AL031679.1-201ENST00000400616 525 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 RNU2-8P-201ENST00000410727 190 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 MTATP6P18-201ENST00000417994 673 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AL356387.2-201ENST00000422272 243 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 AC024082.2-201ENST00000434771 238 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF2Q12947 FHP1-201ENST00000442741 703 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AC006480.1-201ENST00000449887 378 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AC243772.1-201ENST00000451620 410 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 ISCUP1-201ENST00000454451 448 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 RPL23AP24-201ENST00000458203 385 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 NIP7P2-201ENST00000485801 544 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF2Q12947 RN7SKP122-201ENST00000515923 296 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 RN7SKP13-201ENST00000515933 244 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 TRMT10BP1-201ENST00000519377 943 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AC022616.6-201ENST00000520479 119 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF2Q12947 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AC107918.3-201ENST00000533272 382 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AC093012.1-202ENST00000549403 582 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AL109766.1-201ENST00000555080 552 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF2Q12947 AL355802.3-201ENST00000607571 545 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 LINC00622-201ENST00000562811 1570 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 AP000542.2-201ENST00000623199 6179 ntBASIC4.04□□□□□ -1.76
FOXF2Q12947 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXF2Q12947 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXF2Q12947 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXF2Q12947 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF2Q12947 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF2Q12947 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXF2Q12947 AC107068.1-201ENST00000563286 4218 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF2Q12947 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
FOXF2Q12947 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXF2Q12947 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF2Q12947 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXF2Q12947 RNU6-744P-201ENST00000365557 107 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 RNU6-1316P-201ENST00000384242 108 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXF2Q12947 AL080315.1-201ENST00000406055 466 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 AL162578.1-201ENST00000406202 378 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 TXNP7-201ENST00000406296 293 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 RNU6-1068P-201ENST00000410958 103 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 RN7SKP140-201ENST00000411196 284 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 SNRPFP1-201ENST00000414761 252 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 RPS7P15-201ENST00000415804 584 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 TMSB10P2-201ENST00000416049 131 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 AC009302.1-201ENST00000417147 390 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXF2Q12947 RPL36AP10-201ENST00000421785 322 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXF2Q12947 MTCO3P46-201ENST00000425787 232 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 AC234779.1-201ENST00000425910 285 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 RSL24D1P6-201ENST00000426934 401 ntBASIC4.03□□□□□ -1.76
FOXF2Q12947 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms