Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 HMGN1P28-201ENST00000521340 364 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AC023442.1-201ENST00000531247 422 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AL121576.1-201ENST00000556055 276 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH1Q08174 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.31□□□□□ -1.56
PCDH1Q08174 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDH1Q08174 ATP1B3P1-201ENST00000605365 821 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AC011890.2-201ENST00000613393 294 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 MIR6128-201ENST00000615528 109 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 PISRT1.1-201ENST00000616930 107 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 AC092608.2-201ENST00000624427 218 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH1Q08174 AC073869.8-201ENST00000641806 335 ntBASIC5.31□□□□□ -1.56
PCDH1Q08174 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH1Q08174 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDH1Q08174 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDH1Q08174 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PCDH1Q08174 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 RNU6-784P-201ENST00000384330 106 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 ENSAP1-201ENST00000392855 326 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH1Q08174 AL133173.1-201ENST00000423458 397 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC096644.2-201ENST00000429278 159 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 USP9YP16-201ENST00000430287 407 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 NRBF2P3-201ENST00000432731 865 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH1Q08174 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDH1Q08174 PPIAP20-201ENST00000449839 135 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 USP9YP23-201ENST00000455085 407 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 RPS20P21-201ENST00000466859 343 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 RN7SL432P-201ENST00000484057 298 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AP002812.1-201ENST00000495378 474 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 AC116337.1-201ENST00000509680 687 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC100870.1-201ENST00000522035 505 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC090115.3-201ENST00000553218 849 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH1Q08174 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 MRPS21P7-201ENST00000566937 238 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDH1Q08174 AC012616.1-201ENST00000600294 197 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC020910.3-201ENST00000603701 874 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AC006157.1-201ENST00000611750 366 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 MIR6862-1-201ENST00000613016 70 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 MIR6862-2-201ENST00000614755 70 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 ATP5A1P2-202ENST00000616464 443 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDH1Q08174 AC127024.6-201ENST00000621598 424 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 AC009229.4-201ENST00000623854 1947 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 PCAT14-202ENST00000627127 3935 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 AL353796.1-201ENST00000561542 3241 ntBASIC5.3□□□□□ -1.56
PCDH1Q08174 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
PCDH1Q08174 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDH1Q08174 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDH1Q08174 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDH1Q08174 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 AC093775.1-201ENST00000624154 1868 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 U3.7-201ENST00000363668 216 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDH1Q08174 RNY1P14-201ENST00000384426 108 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 SNORD3H-201ENST00000384486 214 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 RNU11-4P-201ENST00000391149 133 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 SNORA11B-201ENST00000408175 129 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 OR2AT2P-201ENST00000413438 905 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH1Q08174 RPS12P5-201ENST00000423449 371 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 MTND6P12-201ENST00000428247 522 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDH1Q08174 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDH1Q08174 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDH1Q08174 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.29□□□□□ -1.56
PCDH1Q08174 H2AFZP6-201ENST00000444403 394 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms