Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 TPT1P8-201ENST00000510120 555 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.61□□□□□ -1.83
GABPAQ06546 SCARNA1-201ENST00000517138 166 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.61□□□□□ -1.83
GABPAQ06546 AC104027.1-201ENST00000521887 300 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AP001189.2-201ENST00000527320 189 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GABPAQ06546 AC090502.2-201ENST00000549267 280 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 MIR3912-201ENST00000577566 105 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AL158163.2-201ENST00000619110 700 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 OR1S1-201ENST00000624470 978 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 AC026634.1-201ENST00000634369 198 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 SEPT7P7-201ENST00000420492 1301 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
GABPAQ06546 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
GABPAQ06546 AP005901.5-201ENST00000545779 1796 ntBASIC3.61□□□□□ -1.83
GABPAQ06546 PABPC1P7-201ENST00000413177 1513 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
GABPAQ06546 RNVU1-3-201ENST00000364313 161 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 snoZ40.1-201ENST00000364540 72 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 Y_RNA.472-201ENST00000384322 102 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.6□□□□□ -1.83
GABPAQ06546 AC092634.6-201ENST00000418558 192 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.6□□□□□ -1.83
GABPAQ06546 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.6□□□□□ -1.83
GABPAQ06546 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GABPAQ06546 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.6□□□□□ -1.83
GABPAQ06546 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.6□□□□□ -1.83
GABPAQ06546 RPL23AP16-201ENST00000441715 421 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.6□□□□□ -1.83
GABPAQ06546 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
GABPAQ06546 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.6□□□□□ -1.83
GABPAQ06546 AC013828.1-201ENST00000481845 158 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 AC108078.3-201ENST00000502633 489 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.6□□□□□ -1.83
GABPAQ06546 UBE2V1P12-201ENST00000503954 474 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.6□□□□□ -1.83
GABPAQ06546 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
GABPAQ06546 MTCYBP37-201ENST00000510642 1133 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 FABP5P12-201ENST00000515543 389 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.6□□□□□ -1.83
GABPAQ06546 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.6□□□□□ -1.83
GABPAQ06546 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.6□□□□□ -1.83
GABPAQ06546 MTCYBP27-201ENST00000555160 670 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 H3F3AP1-201ENST00000559984 334 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 AC008507.1-201ENST00000587506 734 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 U73479.1-201ENST00000618062 168 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.6□□□□□ -1.83
GABPAQ06546 AC006386.2-201ENST00000624491 75 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 AC012005.1-201ENST00000624575 75 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.6□□□□□ -1.83
GABPAQ06546 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GABPAQ06546 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GABPAQ06546 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GABPAQ06546 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.6□□□□□ -1.83
GABPAQ06546 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
GABPAQ06546 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
GABPAQ06546 AC106754.1-201ENST00000562632 1513 ntBASIC3.6□□□□□ -1.83
GABPAQ06546 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
GABPAQ06546 AL035425.3-201ENST00000564206 4996 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 RNU1-75P-201ENST00000347264 129 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GABPAQ06546 SNORD6-201ENST00000365444 73 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 RNA5SP167-201ENST00000365461 116 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GABPAQ06546 AC110754.1-201ENST00000399740 601 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 RPL23AP47-201ENST00000408017 460 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 RPL7P8-201ENST00000411964 730 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.59□□□□□ -1.83
GABPAQ06546 Z75741.2-201ENST00000417272 1167 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 GTF2IP23-201ENST00000423746 351 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.59□□□□□ -1.83
GABPAQ06546 GTF2IP7-202ENST00000436677 309 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.59□□□□□ -1.83
GABPAQ06546 AC104073.1-201ENST00000451988 151 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 RPS20P32-201ENST00000456044 356 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 AC004801.2-202ENST00000463559 283 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 AC068724.1-201ENST00000487100 792 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 OR2A20P-203ENST00000498397 1268 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 AC113347.3-201ENST00000509113 148 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 TMEM248P1-201ENST00000510579 951 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.59□□□□□ -1.83
GABPAQ06546 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.59□□□□□ -1.83
GABPAQ06546 ZNF705CP-201ENST00000530515 889 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.59□□□□□ -1.83
GABPAQ06546 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.59□□□□□ -1.83
GABPAQ06546 AL160237.3-201ENST00000604114 1013 ntBASIC3.59□□□□□ -1.83
GABPAQ06546 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GABPAQ06546 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GABPAQ06546 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
GABPAQ06546 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
GABPAQ06546 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GABPAQ06546 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GABPAQ06546 RPL7P26-201ENST00000333817 754 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
GABPAQ06546 RN7SKP285-201ENST00000410137 318 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AL133384.1-201ENST00000412744 351 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms