Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL355596.1-201ENST00000565399 3996 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AL139276.1-201ENST00000311910 1001 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 RNVU1-3-201ENST00000364313 161 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 SNORA80E-201ENST00000384744 137 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 KRR1P1-201ENST00000419430 803 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 RPL7P37-201ENST00000425095 738 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AL451062.2-201ENST00000427515 271 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 RPS29P26-201ENST00000477483 171 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC025768.1-201ENST00000510057 267 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 SNORA26.10-201ENST00000516427 141 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC087808.1-201ENST00000520501 361 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AP000790.1-201ENST00000528891 737 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC004923.2-201ENST00000529649 369 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AL049870.4-201ENST00000555741 486 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 MIR5195-201ENST00000583555 115 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC012468.1-201ENST00000604888 430 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC110079.1-202ENST00000635213 138 ntBASIC2.05□□□□□ -2.08
HIST1H1AQ02539 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HIST1H1AQ02539 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 OR5H2-201ENST00000355273 945 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 SET-203ENST00000372688 801 ntTSL 2 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 Z75741.2-201ENST00000417272 1167 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 HSFY1P1-201ENST00000423928 1178 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 MTND5P28-201ENST00000438005 1594 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC112653.1-201ENST00000443851 386 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 NANOGNBP1-201ENST00000448444 480 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 MRPL42P6-201ENST00000486397 371 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 RPS27P27-201ENST00000498779 255 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 VN1R104P-201ENST00000505115 1009 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC114322.1-201ENST00000506771 926 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 MTCO3P44-201ENST00000510977 541 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 SUB1P1-201ENST00000524415 382 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 OR7K1P-201ENST00000546439 926 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC007115.1-201ENST00000546853 234 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 MIR4325-201ENST00000583049 90 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AP004372.1-201ENST00000604842 844 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC073111.2-201ENST00000605657 1075 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.04□□□□□ -2.08
HIST1H1AQ02539 AC097372.4-201ENST00000625025 466 ntBASIC2.04□□□□□ -2.08
HIST1H1AQ02539 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC073346.2-201ENST00000624724 2058 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 RNU6-1243P-201ENST00000364028 107 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 RNU1-100P-201ENST00000365255 165 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC087499.2-201ENST00000432861 149 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 RSL24D1P3-201ENST00000449255 495 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 SRIP1-201ENST00000489235 288 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 RN7SKP96-201ENST00000516948 297 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 IGLV3-17-201ENST00000519099 244 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC103810.1-201ENST00000579873 453 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 MIR4635-201ENST00000583759 79 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 VN1R78P-201ENST00000597393 564 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AC006329.2-201ENST00000611491 394 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AL137847.3-201ENST00000611521 109 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AL355810.1-201ENST00000614629 552 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 AL590410.1-201ENST00000617925 333 ntBASIC2.03□□□□□ -2.08
HIST1H1AQ02539 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.03□□□□□ -2.08
HIST1H1AQ02539 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HIST1H1AQ02539 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.09
HIST1H1AQ02539 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
HIST1H1AQ02539 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms