Protein–RNA interactions for Protein: Q01082

SPTBN1, Spectrin beta chain, non-erythrocytic 1, humanhuman

Known RBP Predictions only

Length 2,364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1Q01082 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTBN1Q01082 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
SPTBN1Q01082 AL590084.1-201ENST00000407885 387 ntBASIC1.91□□□□□ -2.1
SPTBN1Q01082 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTBN1Q01082 AC090543.1-201ENST00000492168 485 ntBASIC1.91□□□□□ -2.1
SPTBN1Q01082 RPL38P4-201ENST00000502376 214 ntBASIC1.91□□□□□ -2.1
SPTBN1Q01082 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.91□□□□□ -2.1
SPTBN1Q01082 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.91□□□□□ -2.1
SPTBN1Q01082 AL137072.1-201ENST00000603444 466 ntBASIC1.91□□□□□ -2.1
SPTBN1Q01082 AP001005.3-201ENST00000622049 129 ntBASIC1.91□□□□□ -2.1
SPTBN1Q01082 RN7SKP226-201ENST00000364912 300 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 SNRPFP4-201ENST00000456366 242 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 HMGB1P41-201ENST00000520234 440 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 OR5D17P-201ENST00000531492 978 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 OR4H12P-201ENST00000556269 907 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 AC087468.1-201ENST00000604365 630 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 AL022099.1-201ENST00000604551 712 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 MIR6779-201ENST00000617283 64 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 MTND5P12-201ENST00000502851 1449 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SPTBN1Q01082 RPS7P9-201ENST00000414704 586 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 RNA5SP385-201ENST00000515947 110 ntBASIC1.9□□□□□ -2.11
SPTBN1Q01082 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTBN1Q01082 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPTBN1Q01082 AC066616.2-201ENST00000559334 1481 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTBN1Q01082 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 RN7SKP123-201ENST00000410732 291 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 RPS15AP28-201ENST00000435088 386 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 NDUFA5P6-201ENST00000542110 379 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 AC009831.4-201ENST00000620744 325 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 AC093909.5-201ENST00000621839 1799 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 EXOC5P1-201ENST00000510543 1969 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 SAGE4P-201ENST00000442271 3381 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 MTND5P28-201ENST00000438005 1594 ntBASIC1.89□□□□□ -2.11
SPTBN1Q01082 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTBN1Q01082 MIR221-201ENST00000385135 110 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 ATG3P1-201ENST00000419507 911 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 AL118520.1-201ENST00000450770 291 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 SCARNA16.3-201ENST00000516595 184 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SPTBN1Q01082 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTBN1Q01082 AL590004.2-201ENST00000404787 371 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 RNA5SP270-201ENST00000411361 118 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 AL162388.1-201ENST00000450912 352 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 RPL23AP44-201ENST00000482216 473 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 RAC1P5-201ENST00000512182 576 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 AC011611.5-201ENST00000552477 578 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 AL354943.1-201ENST00000572103 781 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 MIR4255-201ENST00000579351 72 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 AC006254.3-201ENST00000603353 884 ntBASIC1.88□□□□□ -2.11
SPTBN1Q01082 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SPTBN1Q01082 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTBN1Q01082 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTBN1Q01082 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPTBN1Q01082 AP1B1P2-201ENST00000416196 106 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 AL591719.1-201ENST00000444669 744 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 AL163540.1-201ENST00000485382 386 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 AC140059.1-201ENST00000489238 361 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 SNORA70.14-201ENST00000516205 110 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 AC008083.2-201ENST00000546707 476 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 AL451074.6-201ENST00000608512 729 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 AL356266.1-201ENST00000623311 483 ntBASIC1.87□□□□□ -2.11
SPTBN1Q01082 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.87□□□□□ -2.11
SPTBN1Q01082 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPTBN1Q01082 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SPTBN1Q01082 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms