Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNA5SP258-201ENST00000362750 119 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.43□□□□□ -2.02
H3F3AP84243 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
H3F3AP84243 OFD1P18Y-201ENST00000420889 959 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 COTL1P1-201ENST00000422309 375 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.43□□□□□ -2.02
H3F3AP84243 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.43□□□□□ -2.02
H3F3AP84243 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.43□□□□□ -2.02
H3F3AP84243 AC103975.1-201ENST00000482506 483 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 RPL21P131-201ENST00000497298 483 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.43□□□□□ -2.02
H3F3AP84243 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.43□□□□□ -2.02
H3F3AP84243 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.43□□□□□ -2.02
H3F3AP84243 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
H3F3AP84243 HSPE1P20-201ENST00000538133 289 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.43□□□□□ -2.02
H3F3AP84243 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.43□□□□□ -2.02
H3F3AP84243 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
H3F3AP84243 AC090695.1-201ENST00000561269 1222 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 AADACP1-206ENST00000561502 1193 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 EIF5A2P1-201ENST00000564027 460 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.43□□□□□ -2.02
H3F3AP84243 MTCO3P22-201ENST00000603219 784 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 NUTF2P8-201ENST00000604593 363 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.43□□□□□ -2.02
H3F3AP84243 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
H3F3AP84243 AC004696.1-201ENST00000614345 607 ntBASIC2.43□□□□□ -2.02
H3F3AP84243 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.43□□□□□ -2.02
H3F3AP84243 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
H3F3AP84243 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.43□□□□□ -2.02
H3F3AP84243 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
H3F3AP84243 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
H3F3AP84243 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
H3F3AP84243 AC006378.2-201ENST00000623178 2476 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AL512646.1-201ENST00000269395 1077 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
H3F3AP84243 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
H3F3AP84243 FO393413.1-201ENST00000402892 195 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 NDUFB4P4-201ENST00000404822 243 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AL592148.1-201ENST00000413568 445 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.42□□□□□ -2.02
H3F3AP84243 AC073508.1-201ENST00000428866 656 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AC004865.1-201ENST00000442276 1003 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AC233982.1-201ENST00000451247 436 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 MRPL35P4-201ENST00000453682 566 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 RPL23AP31-201ENST00000456160 467 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 RPL30P14-201ENST00000482744 348 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 RPL9P33-201ENST00000484311 566 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.42□□□□□ -2.02
H3F3AP84243 AC009901.1-201ENST00000506703 541 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AC026412.2-201ENST00000512270 1075 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 C1DP5-201ENST00000525775 383 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.42□□□□□ -2.02
H3F3AP84243 AL391156.1-201ENST00000554965 554 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.42□□□□□ -2.02
H3F3AP84243 AC011471.1-201ENST00000585766 187 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AC008687.2-201ENST00000597865 520 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 VN1R92P-201ENST00000598511 928 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AL133507.1-201ENST00000605269 557 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 ATP1B3P1-201ENST00000605365 821 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.42□□□□□ -2.02
H3F3AP84243 AC007275.1-201ENST00000621243 671 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.42□□□□□ -2.02
H3F3AP84243 AC079228.1-201ENST00000624774 1049 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.42□□□□□ -2.02
H3F3AP84243 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.42□□□□□ -2.02
H3F3AP84243 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
H3F3AP84243 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
H3F3AP84243 AC091564.4-201ENST00000533934 2194 ntBASIC2.42□□□□□ -2.02
H3F3AP84243 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.41□□□□□ -2.02
H3F3AP84243 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
H3F3AP84243 RNU6-7-201ENST00000364784 107 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 RNU6-8-201ENST00000365467 107 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
H3F3AP84243 RNA5SP252-201ENST00000391131 119 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AL512633.1-201ENST00000399931 655 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 SSXP10-201ENST00000402595 565 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AL139095.1-201ENST00000404326 391 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.41□□□□□ -2.02
H3F3AP84243 LINC01347-201ENST00000417964 355 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AC091390.3-201ENST00000426478 338 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AL513321.1-201ENST00000441175 761 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.41□□□□□ -2.02
H3F3AP84243 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.41□□□□□ -2.02
H3F3AP84243 RPL23AP20-201ENST00000447965 421 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AP000705.1-201ENST00000454567 350 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.41□□□□□ -2.02
H3F3AP84243 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
H3F3AP84243 SEM1P1-201ENST00000506694 209 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AC108157.1-201ENST00000510511 539 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 SETP12-201ENST00000514068 805 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.41□□□□□ -2.02
H3F3AP84243 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AL133271.1-201ENST00000538229 291 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.41□□□□□ -2.02
H3F3AP84243 AC092470.1-201ENST00000546187 132 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AC093014.1-201ENST00000548926 724 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 GTF3AP2-201ENST00000557014 266 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AC245036.5-201ENST00000596330 847 ntBASIC2.41□□□□□ -2.02
H3F3AP84243 AP000787.2-201ENST00000604432 568 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms