Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 THAP5P1-201ENST00000439089 262 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC007967.1-201ENST00000455422 1159 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CL1P78423 snoU13.24-201ENST00000458998 104 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 UQCRHP4-201ENST00000471686 272 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC091167.1-201ENST00000492017 396 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AC108475.1-201ENST00000507880 950 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CL1P78423 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC023141.12-201ENST00000512399 199 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 MTCO3P28-201ENST00000513351 515 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 FABP5P5-201ENST00000515537 406 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AC109635.4-202ENST00000531666 412 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CL1P78423 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC007115.1-201ENST00000546853 234 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AC063950.1-201ENST00000552036 308 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 ZNF519P3-201ENST00000557158 1032 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC060771.1-201ENST00000582031 164 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC073544.2-201ENST00000601155 540 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC068276.1-201ENST00000605793 379 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AL136295.6-201ENST00000610486 658 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC015967.1-201ENST00000619893 476 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CL1P78423 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.33□□□□□ -1.88
CX3CL1P78423 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CL1P78423 LINC02471-203ENST00000641941 4752 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CL1P78423 AL390237.1-201ENST00000404226 1415 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CX3CL1P78423 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CL1P78423 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CX3CL1P78423 AC011460.1-201ENST00000636268 1834 ntBASIC3.33□□□□□ -1.88
CX3CL1P78423 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.33□□□□□ -1.88
CX3CL1P78423 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 AC009902.3-201ENST00000606235 2172 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CL1P78423 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CL1P78423 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CX3CL1P78423 FGF7P2-201ENST00000332473 296 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 MIR383-201ENST00000362257 73 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 Y_RNA.46-201ENST00000362695 102 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 RNU6-1078P-201ENST00000364522 103 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 RPS20P2-201ENST00000402520 389 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC016907.1-201ENST00000419483 435 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AL356583.2-201ENST00000426536 280 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CL1P78423 OR4K11P-201ENST00000431829 904 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 RPL21P112-201ENST00000434403 463 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 MTND1P28-201ENST00000435623 950 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 UBE2V1P13-201ENST00000436983 439 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CL1P78423 AL356535.1-201ENST00000440335 398 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CL1P78423 AC239367.2-201ENST00000447309 705 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 MTND1P29-201ENST00000448112 647 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AL590365.1-201ENST00000450788 243 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 MTND4LP3-201ENST00000468320 276 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CX3CL1P78423 AF213884.1-201ENST00000488102 463 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CL1P78423 AC110792.1-201ENST00000491826 472 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC093278.1-201ENST00000494700 600 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 RPL23AP55-201ENST00000498163 452 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC004069.2-201ENST00000505438 1114 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CL1P78423 AC010424.1-201ENST00000506336 297 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CL1P78423 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CL1P78423 RNU6-1003P-201ENST00000517099 105 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CL1P78423 RPL12P22-201ENST00000519073 490 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC105233.3-201ENST00000531125 744 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.32□□□□□ -1.88
CX3CL1P78423 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.32□□□□□ -1.88
CX3CL1P78423 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CL1P78423 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.32□□□□□ -1.88
CX3CL1P78423 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CX3CL1P78423 RSL24D1P11-201ENST00000591045 491 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC064807.4-201ENST00000607201 407 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC012150.2-201ENST00000621300 544 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 AC112200.1-201ENST00000625015 234 ntBASIC3.32□□□□□ -1.88
CX3CL1P78423 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms