Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.39□□□□□ -2.03
HIST1H3AP68431 RPL23AP88-201ENST00000605759 454 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 AC013468.1-201ENST00000608680 598 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 AL355810.1-201ENST00000614629 552 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.39□□□□□ -2.03
HIST1H3AP68431 AL360181.4-201ENST00000621752 134 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 AC079228.1-201ENST00000624774 1049 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 U6.107-201ENST00000637108 79 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 AC119674.1-220ENST00000641502 1048 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 AC109315.1-201ENST00000584143 1347 ntBASIC2.39□□□□□ -2.03
HIST1H3AP68431 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H3AP68431 CUL1P1-201ENST00000509510 2425 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H3AP68431 RNU6-819P-201ENST00000364116 107 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 RNU1-109P-201ENST00000383960 147 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 RNU6-339P-201ENST00000384310 107 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 RPS4XP3-201ENST00000398541 413 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AL139095.1-201ENST00000404326 391 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 HMGN2P30-201ENST00000423237 256 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 PTP4A1P3-201ENST00000433661 420 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 MTCYBP34-201ENST00000439552 670 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AP000705.1-201ENST00000454567 350 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 AIG1P1-201ENST00000503376 148 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 MTCO3P44-201ENST00000510977 541 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 SNORA74D-201ENST00000516404 141 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AP001804.3-201ENST00000525146 880 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 SNRPGP16-201ENST00000533275 226 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC009268.1-201ENST00000561352 1203 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC020895.1-201ENST00000595362 272 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC025588.3-201ENST00000604182 274 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AP000787.2-201ENST00000604432 568 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC107905.1-201ENST00000616204 426 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.38□□□□□ -2.03
HIST1H3AP68431 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.38□□□□□ -2.03
HIST1H3AP68431 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H3AP68431 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H3AP68431 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HIST1H3AP68431 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H3AP68431 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H3AP68431 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H3AP68431 RNU1-112P-201ENST00000364401 164 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 RNU6-1180P-201ENST00000364935 107 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 RNU6-1226P-201ENST00000384317 107 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 MIR9-1-201ENST00000385198 89 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H3AP68431 AL513477.1-202ENST00000417061 214 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC114973.1-201ENST00000429057 632 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AL590664.1-201ENST00000448065 339 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC234775.1-201ENST00000454247 670 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 snoU13.22-201ENST00000459428 104 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC080014.1-201ENST00000496877 1201 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 SNORA31.8-201ENST00000516327 108 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 SNORA70.24-201ENST00000517233 118 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 OR10V3P-201ENST00000525712 725 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC093014.1-201ENST00000548926 724 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC079600.2-201ENST00000550076 130 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC007954.1-201ENST00000554198 494 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H3AP68431 AC090666.1-201ENST00000578241 445 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 DPRXP5-201ENST00000604662 539 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 TAB3P1-202ENST00000452645 1634 ntBASIC2.37□□□□□ -2.03
HIST1H3AP68431 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.37□□□□□ -2.03
HIST1H3AP68431 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HIST1H3AP68431 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.36□□□□□ -2.03
HIST1H3AP68431 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.36□□□□□ -2.03
HIST1H3AP68431 RNU6-989P-201ENST00000362756 107 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 RNU6-761P-201ENST00000384148 107 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 SNORA9-201ENST00000384215 133 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HIST1H3AP68431 AL356057.2-201ENST00000403318 432 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 AL137014.1-201ENST00000420490 1226 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.36□□□□□ -2.03
HIST1H3AP68431 AC006946.1-201ENST00000429106 328 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 AC087499.2-201ENST00000432861 149 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.36□□□□□ -2.03
HIST1H3AP68431 AL645638.1-201ENST00000440519 361 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.36□□□□□ -2.03
HIST1H3AP68431 RPS3AP12-201ENST00000443616 753 ntBASIC2.36□□□□□ -2.03
HIST1H3AP68431 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms