Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.21□□□□□ -1.9
RPS4XP62701 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.21□□□□□ -1.9
RPS4XP62701 RNU2-27P-201ENST00000516185 142 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 SNORA70.14-201ENST00000516205 110 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 IGKV2D-23-201ENST00000518179 286 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.21□□□□□ -1.9
RPS4XP62701 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RPS4XP62701 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.21□□□□□ -1.9
RPS4XP62701 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.21□□□□□ -1.9
RPS4XP62701 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.21□□□□□ -1.9
RPS4XP62701 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPS4XP62701 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.21□□□□□ -1.9
RPS4XP62701 MIR4425-201ENST00000580572 84 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.21□□□□□ -1.9
RPS4XP62701 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.21□□□□□ -1.9
RPS4XP62701 VN1R78P-201ENST00000597393 564 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 BNIP3P38-201ENST00000601117 544 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC091057.2-201ENST00000602594 792 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC012669.1-201ENST00000603209 283 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 BNIP3P11-201ENST00000603878 563 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 ELOCP35-201ENST00000604289 336 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC080013.3-201ENST00000606839 578 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC006023.2-201ENST00000609916 167 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC013470.4-201ENST00000619978 986 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC048347.1-201ENST00000624621 427 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC116618.1-201ENST00000634617 774 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 AC006927.4-201ENST00000639187 543 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 MTND5P1-201ENST00000445440 1375 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPS4XP62701 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RPS4XP62701 AC073346.2-201ENST00000624724 2058 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
RPS4XP62701 MFSD8-233ENST00000641482 4860 ntBASIC3.21□□□□□ -1.9
RPS4XP62701 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RPS4XP62701 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RPS4XP62701 AP000776.1-201ENST00000530032 1663 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPS4XP62701 MTND5P24-201ENST00000438892 1767 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AL356473.1-201ENST00000406203 1408 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPS4XP62701 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RPS4XP62701 MIR491-201ENST00000384877 84 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 RN7SKP53-201ENST00000411337 315 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 RNU2-71P-201ENST00000411395 189 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 RPL7P30-201ENST00000420888 709 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.2□□□□□ -1.9
RPS4XP62701 AC019178.2-201ENST00000423595 505 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.2□□□□□ -1.9
RPS4XP62701 AL590233.1-201ENST00000430017 456 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AL158071.1-201ENST00000430315 461 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 CYCSP43-201ENST00000438233 310 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.2□□□□□ -1.9
RPS4XP62701 HSPE1P28-201ENST00000443139 211 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AC005297.2-201ENST00000450430 606 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AC097493.1-201ENST00000463958 372 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AC023598.1-201ENST00000472521 361 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 RN7SL293P-201ENST00000481765 281 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 COX7A2P2-201ENST00000505291 250 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AC021146.8-201ENST00000507455 733 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.2□□□□□ -1.9
RPS4XP62701 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.2□□□□□ -1.9
RPS4XP62701 AC110760.3-202ENST00000515177 371 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 RNU6-1095P-201ENST00000516148 108 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.2□□□□□ -1.9
RPS4XP62701 AC022861.1-201ENST00000522981 663 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 OR5AK1P-201ENST00000524837 922 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 SETP7-201ENST00000552169 453 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 DUXAP6-201ENST00000553858 601 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 ZNF192P1-203ENST00000565888 810 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AGGF1P5-201ENST00000567900 919 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.2□□□□□ -1.9
RPS4XP62701 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.2□□□□□ -1.9
RPS4XP62701 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.2□□□□□ -1.9
RPS4XP62701 AL034351.1-201ENST00000605288 668 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.2□□□□□ -1.9
RPS4XP62701 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPS4XP62701 AC091953.5-201ENST00000622919 233 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 U6.105-201ENST00000637379 88 ntBASIC3.2□□□□□ -1.9
RPS4XP62701 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RPS4XP62701 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RPS4XP62701 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RPS4XP62701 OR5BR1P-201ENST00000524992 1330 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPS4XP62701 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPS4XP62701 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPS4XP62701 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.19□□□□□ -1.9
RPS4XP62701 RNA5SP51-201ENST00000364750 119 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.19□□□□□ -1.9
RPS4XP62701 MIR513B-201ENST00000385136 84 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPS4XP62701 TAF9BP1-201ENST00000396646 746 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 CYCSP45-201ENST00000402289 315 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 AC245052.5-201ENST00000416320 649 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 MTATP6P27-201ENST00000416987 621 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 HMGB1P49-201ENST00000418882 569 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 OR1AA1P-201ENST00000419597 916 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 AL139421.1-201ENST00000423010 169 ntBASIC3.19□□□□□ -1.9
RPS4XP62701 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms