Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.16□□□□□ -1.58
ERVFC1P60507 RNA5SP447-201ENST00000363749 119 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 RNU6-444P-201ENST00000383988 108 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 RPL7P60-201ENST00000397636 735 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ERVFC1P60507 RNA5SP345-201ENST00000410646 108 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 AC007283.2-201ENST00000424739 197 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 RPS26P40-201ENST00000435209 294 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AL731563.1-201ENST00000442202 214 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 NUTF2P7-201ENST00000453086 375 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AL691482.1-201ENST00000453255 87 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 MTCO3P2-201ENST00000457365 171 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 PABPC1P3-201ENST00000469174 459 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 HSPD1P15-201ENST00000505573 1122 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 RNU4-29P-201ENST00000515943 174 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 Y_RNA.665-201ENST00000516177 98 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 SNORD27.1-201ENST00000516319 72 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 RN7SKP21-201ENST00000516503 220 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 RNU6-988P-201ENST00000519081 107 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.16□□□□□ -1.58
ERVFC1P60507 COPS8P3-201ENST00000526024 482 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 AC133555.2-201ENST00000550213 292 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.16□□□□□ -1.58
ERVFC1P60507 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 AC074050.1-201ENST00000563247 211 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AL356432.3-201ENST00000568952 465 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.16□□□□□ -1.58
ERVFC1P60507 AP000654.2-201ENST00000605633 586 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.16□□□□□ -1.58
ERVFC1P60507 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 AP001029.2-203ENST00000589795 4910 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ERVFC1P60507 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 AC092125.1-201ENST00000562568 1995 ntBASIC5.16□□□□□ -1.58
ERVFC1P60507 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.16□□□□□ -1.58
ERVFC1P60507 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERVFC1P60507 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
ERVFC1P60507 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.15□□□□□ -1.58
ERVFC1P60507 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.15□□□□□ -1.58
ERVFC1P60507 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ERVFC1P60507 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERVFC1P60507 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
ERVFC1P60507 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ERVFC1P60507 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.15□□□□□ -1.58
ERVFC1P60507 Y_RNA.112-201ENST00000363250 102 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 U3.12-201ENST00000364498 214 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AL031679.1-201ENST00000400616 525 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 RNU4-25P-201ENST00000410569 230 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERVFC1P60507 AC006548.1-201ENST00000427470 102 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AC137499.1-201ENST00000427602 88 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.15□□□□□ -1.59
ERVFC1P60507 AC004975.1-201ENST00000428733 208 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 PPIAP21-201ENST00000464473 501 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AC023424.1-201ENST00000496058 459 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AC025164.1-201ENST00000496249 478 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 SCARNA24.1-201ENST00000516465 137 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 snoU109.6-201ENST00000516831 118 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.15□□□□□ -1.59
ERVFC1P60507 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.15□□□□□ -1.59
ERVFC1P60507 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.15□□□□□ -1.59
ERVFC1P60507 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.15□□□□□ -1.59
ERVFC1P60507 AL110118.1-201ENST00000553543 400 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.15□□□□□ -1.59
ERVFC1P60507 AL049839.1-201ENST00000556151 657 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.15□□□□□ -1.59
ERVFC1P60507 APOOP1-201ENST00000604695 592 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.15□□□□□ -1.59
ERVFC1P60507 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ERVFC1P60507 CR381572.1-201ENST00000625098 102 ntBASIC5.15□□□□□ -1.59
ERVFC1P60507 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.15□□□□□ -1.59
ERVFC1P60507 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
ERVFC1P60507 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.15□□□□□ -1.59
ERVFC1P60507 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ERVFC1P60507 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.15□□□□□ -1.59
ERVFC1P60507 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERVFC1P60507 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERVFC1P60507 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.15□□□□□ -1.59
ERVFC1P60507 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
ERVFC1P60507 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.14□□□□□ -1.59
ERVFC1P60507 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERVFC1P60507 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERVFC1P60507 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ERVFC1P60507 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ERVFC1P60507 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.14□□□□□ -1.59
ERVFC1P60507 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERVFC1P60507 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms