Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR6733-201ENST00000635723 61 ntBASIC3.31□□□□□ -1.88
SSR1P43307 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSR1P43307 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.31□□□□□ -1.88
SSR1P43307 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SSR1P43307 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SSR1P43307 AC024341.1-201ENST00000526444 1552 ntBASIC3.3□□□□□ -1.88
SSR1P43307 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.3□□□□□ -1.88
SSR1P43307 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 RNA5SP258-201ENST00000362750 119 ntBASIC3.3□□□□□ -1.88
SSR1P43307 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSR1P43307 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 U6.112-201ENST00000384129 70 ntBASIC3.3□□□□□ -1.88
SSR1P43307 MIR649-201ENST00000384843 97 ntBASIC3.3□□□□□ -1.88
SSR1P43307 MCTS2P-201ENST00000394552 546 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC110754.1-201ENST00000399740 601 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.3□□□□□ -1.88
SSR1P43307 RAD23BP2-201ENST00000416003 1207 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC096632.1-201ENST00000427395 310 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC097713.2-201ENST00000430199 356 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AL159987.2-201ENST00000432754 307 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.3□□□□□ -1.88
SSR1P43307 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.3□□□□□ -1.88
SSR1P43307 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSR1P43307 OR51B8P-201ENST00000449892 769 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.3□□□□□ -1.88
SSR1P43307 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.3□□□□□ -1.88
SSR1P43307 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.3□□□□□ -1.88
SSR1P43307 AC110794.1-201ENST00000505816 425 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC002456.2-201ENST00000509356 380 ntBASIC3.3□□□□□ -1.88
SSR1P43307 MTND2P31-201ENST00000512602 616 ntBASIC3.3□□□□□ -1.88
SSR1P43307 DUXAP2-201ENST00000519198 589 ntBASIC3.3□□□□□ -1.88
SSR1P43307 OR4A45P-201ENST00000529954 901 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.3□□□□□ -1.88
SSR1P43307 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.3□□□□□ -1.88
SSR1P43307 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.3□□□□□ -1.88
SSR1P43307 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.3□□□□□ -1.88
SSR1P43307 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 MIR6076-201ENST00000617521 113 ntBASIC3.3□□□□□ -1.88
SSR1P43307 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.3□□□□□ -1.88
SSR1P43307 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSR1P43307 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SSR1P43307 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
SSR1P43307 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSR1P43307 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.29□□□□□ -1.88
SSR1P43307 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC006378.2-201ENST00000623178 2476 ntBASIC3.29□□□□□ -1.88
SSR1P43307 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSR1P43307 U3.6-201ENST00000363622 211 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.29□□□□□ -1.88
SSR1P43307 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.29□□□□□ -1.88
SSR1P43307 AL137014.1-201ENST00000420490 1226 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.29□□□□□ -1.88
SSR1P43307 AC127537.2-201ENST00000439258 465 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AL158053.1-201ENST00000441503 453 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.29□□□□□ -1.88
SSR1P43307 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AP000852.1-201ENST00000472460 573 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC015908.1-201ENST00000478739 476 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.29□□□□□ -1.88
SSR1P43307 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC108043.1-201ENST00000512696 574 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.29□□□□□ -1.88
SSR1P43307 AC124293.1-201ENST00000530034 493 ntBASIC3.29□□□□□ -1.88
SSR1P43307 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SSR1P43307 RPL21P12-201ENST00000559810 515 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.29□□□□□ -1.88
SSR1P43307 CKS1BP3-201ENST00000600888 237 ntBASIC3.29□□□□□ -1.88
SSR1P43307 RPL12P50-201ENST00000603116 116 ntBASIC3.29□□□□□ -1.88
SSR1P43307 ELOCP35-201ENST00000604289 336 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AL161734.1-201ENST00000609720 557 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC073592.7-201ENST00000623659 507 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC095031.1-201ENST00000623685 672 ntBASIC3.29□□□□□ -1.88
SSR1P43307 AC079228.1-201ENST00000624774 1049 ntBASIC3.29□□□□□ -1.88
SSR1P43307 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSR1P43307 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSR1P43307 ZNF849P-201ENST00000594711 1566 ntBASIC3.29□□□□□ -1.88
SSR1P43307 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SSR1P43307 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.28□□□□□ -1.88
SSR1P43307 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SSR1P43307 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SSR1P43307 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSR1P43307 RNU6-1249P-201ENST00000363237 111 ntBASIC3.28□□□□□ -1.88
SSR1P43307 RNU6-761P-201ENST00000384148 107 ntBASIC3.28□□□□□ -1.88
SSR1P43307 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSR1P43307 RNU6-575P-201ENST00000411326 105 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.28□□□□□ -1.88
SSR1P43307 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.28□□□□□ -1.88
SSR1P43307 UBE2D3P3-201ENST00000426992 425 ntBASIC3.28□□□□□ -1.88
SSR1P43307 NDUFA5P7-201ENST00000452914 242 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.28□□□□□ -1.88
SSR1P43307 PRSS3P4-201ENST00000453323 162 ntBASIC3.28□□□□□ -1.88
SSR1P43307 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
SSR1P43307 SETP6-201ENST00000479329 568 ntBASIC3.28□□□□□ -1.88
SSR1P43307 OR5H5P-201ENST00000503164 928 ntBASIC3.28□□□□□ -1.88
SSR1P43307 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.28□□□□□ -1.88
SSR1P43307 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms