Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 HMGB1P1-201ENST00000522557 636 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AC124293.1-201ENST00000530034 493 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AP000916.1-201ENST00000533869 835 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFSF9P41273 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.01□□□□□ -1.93
TNFSF9P41273 AC138761.3-201ENST00000579993 334 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.01□□□□□ -1.93
TNFSF9P41273 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.01□□□□□ -1.93
TNFSF9P41273 AC006254.3-201ENST00000603353 884 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 OR2AS2P-201ENST00000606902 342 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFSF9P41273 AC068722.2-201ENST00000618734 544 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFSF9P41273 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AC098679.5-201ENST00000624394 571 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFSF9P41273 HPVC1-201ENST00000629899 1198 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 AL163152.1-201ENST00000642001 374 ntBASIC3.01□□□□□ -1.93
TNFSF9P41273 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TNFSF9P41273 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TNFSF9P41273 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TNFSF9P41273 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFSF9P41273 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3□□□□□ -1.93
TNFSF9P41273 MTND5P19-201ENST00000424872 1794 ntBASIC3□□□□□ -1.93
TNFSF9P41273 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
TNFSF9P41273 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3□□□□□ -1.93
TNFSF9P41273 AL589826.1-201ENST00000340697 249 ntBASIC3□□□□□ -1.93
TNFSF9P41273 RNU6-1249P-201ENST00000363237 111 ntBASIC3□□□□□ -1.93
TNFSF9P41273 RNU6-792P-201ENST00000363490 107 ntBASIC3□□□□□ -1.93
TNFSF9P41273 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TNFSF9P41273 RNU6-481P-201ENST00000384194 107 ntBASIC3□□□□□ -1.93
TNFSF9P41273 MIR649-201ENST00000384843 97 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AL138827.1-201ENST00000402666 306 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AL158050.1-201ENST00000416077 457 ntBASIC3□□□□□ -1.93
TNFSF9P41273 MTCO3P12-201ENST00000416718 547 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AC246680.2-201ENST00000422106 389 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AL121882.1-201ENST00000422893 417 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AL035410.1-201ENST00000427409 427 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 AL513043.1-201ENST00000439124 535 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AC108938.1-201ENST00000451204 136 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 snoU13.4-201ENST00000458916 104 ntBASIC3□□□□□ -1.93
TNFSF9P41273 RPS4XP6-201ENST00000477670 797 ntBASIC3□□□□□ -1.93
TNFSF9P41273 RPL21P47-201ENST00000483696 477 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AC011352.3-201ENST00000505162 593 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AC118282.1-201ENST00000506408 765 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 AC119751.1-201ENST00000513357 765 ntBASIC3□□□□□ -1.93
TNFSF9P41273 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3□□□□□ -1.93
TNFSF9P41273 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3□□□□□ -1.93
TNFSF9P41273 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3□□□□□ -1.93
TNFSF9P41273 ZNF861P-201ENST00000588126 639 ntBASIC3□□□□□ -1.93
TNFSF9P41273 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AC005046.1-201ENST00000608515 625 ntBASIC3□□□□□ -1.93
TNFSF9P41273 AP004247.3-201ENST00000608682 624 ntBASIC3□□□□□ -1.93
TNFSF9P41273 VN1R9P-201ENST00000614184 867 ntBASIC3□□□□□ -1.93
TNFSF9P41273 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3□□□□□ -1.93
TNFSF9P41273 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3□□□□□ -1.93
TNFSF9P41273 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
TNFSF9P41273 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
TNFSF9P41273 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3□□□□□ -1.93
TNFSF9P41273 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF9P41273 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF9P41273 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF9P41273 RNU6-921P-201ENST00000384361 107 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 MTCO3P31-201ENST00000405526 789 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 RNU2-52P-201ENST00000410680 190 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AC009237.2-201ENST00000421358 284 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC233981.1-201ENST00000423224 461 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AL512661.1-201ENST00000434586 1253 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF9P41273 RABEPKP1-201ENST00000440529 1026 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC104073.1-201ENST00000451988 151 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC090525.1-201ENST00000479116 478 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.99□□□□□ -1.93
TNFSF9P41273 OR5H5P-201ENST00000503164 928 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC118465.1-201ENST00000513820 1271 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 RNU1-61P-201ENST00000516107 151 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 RNA5SP468-201ENST00000516782 93 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.99□□□□□ -1.93
TNFSF9P41273 AC007954.1-201ENST00000554198 494 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AL163153.1-201ENST00000554223 283 ntBASIC2.99□□□□□ -1.93
TNFSF9P41273 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms