Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX3P41225 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SOX3P41225 AL136964.1-201ENST00000622038 2990 ntBASIC3.39□□□□□ -1.87
SOX3P41225 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX3P41225 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX3P41225 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX3P41225 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SOX3P41225 RNVU1-3-201ENST00000364313 161 ntBASIC3.38□□□□□ -1.87
SOX3P41225 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.38□□□□□ -1.87
SOX3P41225 SNORD82-201ENST00000365530 70 ntBASIC3.38□□□□□ -1.87
SOX3P41225 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 RNU6-356P-201ENST00000384140 107 ntBASIC3.38□□□□□ -1.87
SOX3P41225 RPL31P1-201ENST00000398116 372 ntBASIC3.38□□□□□ -1.87
SOX3P41225 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.38□□□□□ -1.87
SOX3P41225 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX3P41225 ATP5A1P2-201ENST00000412323 255 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX3P41225 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX3P41225 USP9YP26-201ENST00000421008 661 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AC012065.2-201ENST00000421295 375 ntBASIC3.38□□□□□ -1.87
SOX3P41225 ZYG11AP1-201ENST00000430329 837 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AL445567.1-201ENST00000439121 144 ntBASIC3.38□□□□□ -1.87
SOX3P41225 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX3P41225 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.38□□□□□ -1.87
SOX3P41225 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX3P41225 PPIAP3-201ENST00000450588 505 ntBASIC3.38□□□□□ -1.87
SOX3P41225 RPL23AP35-201ENST00000451906 501 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX3P41225 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX3P41225 RNU7-125P-201ENST00000458760 62 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX3P41225 BET1P1-201ENST00000482276 359 ntBASIC3.38□□□□□ -1.87
SOX3P41225 RPS3AP50-201ENST00000487064 803 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX3P41225 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.38□□□□□ -1.87
SOX3P41225 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.38□□□□□ -1.87
SOX3P41225 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX3P41225 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX3P41225 RNU6-678P-201ENST00000516832 109 ntBASIC3.38□□□□□ -1.87
SOX3P41225 RNU6-232P-201ENST00000517144 64 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX3P41225 OR7K1P-201ENST00000546439 926 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AL121766.1-201ENST00000547436 487 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SOX3P41225 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX3P41225 AC090888.1-201ENST00000561335 1141 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX3P41225 AC109446.2-201ENST00000567872 497 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AC008088.1-201ENST00000580993 280 ntBASIC3.38□□□□□ -1.87
SOX3P41225 MAGOH2P-202ENST00000584384 429 ntBASIC3.38□□□□□ -1.87
SOX3P41225 KLKP1-201ENST00000595979 403 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AP000811.1-201ENST00000603803 651 ntBASIC3.38□□□□□ -1.87
SOX3P41225 RNA5SP108-201ENST00000605921 117 ntBASIC3.38□□□□□ -1.87
SOX3P41225 AC073968.1-201ENST00000618594 637 ntBASIC3.38□□□□□ -1.87
SOX3P41225 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SOX3P41225 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 DCAF13P1-201ENST00000495256 1330 ntBASIC3.38□□□□□ -1.87
SOX3P41225 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX3P41225 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX3P41225 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 NUP58P1-201ENST00000502546 1738 ntBASIC3.37□□□□□ -1.87
SOX3P41225 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 SNORA71.3-201ENST00000362582 128 ntBASIC3.37□□□□□ -1.87
SOX3P41225 RNU6-374P-201ENST00000364146 108 ntBASIC3.37□□□□□ -1.87
SOX3P41225 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 MIR449B-201ENST00000384995 97 ntBASIC3.37□□□□□ -1.87
SOX3P41225 MT-TC-201ENST00000387405 66 ntBASIC3.37□□□□□ -1.87
SOX3P41225 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 DHFRP6-201ENST00000401776 268 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AL355379.1-201ENST00000405542 640 ntBASIC3.37□□□□□ -1.87
SOX3P41225 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX3P41225 RN7SKP285-201ENST00000410137 318 ntBASIC3.37□□□□□ -1.87
SOX3P41225 HMGB3P20-201ENST00000417997 600 ntBASIC3.37□□□□□ -1.87
SOX3P41225 NDUFB1P1-201ENST00000435191 180 ntBASIC3.37□□□□□ -1.87
SOX3P41225 HSPD1P21-201ENST00000436541 245 ntBASIC3.37□□□□□ -1.87
SOX3P41225 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SOX3P41225 ARPC3P5-201ENST00000448802 534 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 SNRPGP5-201ENST00000456003 220 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX3P41225 RNU7-136P-201ENST00000458819 69 ntBASIC3.37□□□□□ -1.87
SOX3P41225 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.37□□□□□ -1.87
SOX3P41225 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX3P41225 RPF2P2-201ENST00000504693 896 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AC026784.1-201ENST00000507986 352 ntBASIC3.37□□□□□ -1.87
SOX3P41225 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.37□□□□□ -1.87
SOX3P41225 PCBP2P3-201ENST00000509726 843 ntBASIC3.37□□□□□ -1.87
SOX3P41225 LTV1P1-201ENST00000510683 1237 ntBASIC3.37□□□□□ -1.87
SOX3P41225 PTGES3P3-201ENST00000511479 482 ntBASIC3.37□□□□□ -1.87
SOX3P41225 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms