Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RN7SL601P-201ENST00000471221 293 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 RPS3AP50-201ENST00000487064 803 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM23P36406 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM23P36406 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM23P36406 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM23P36406 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM23P36406 OR5AP1P-201ENST00000529730 940 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.39□□□□□ -1.87
TRIM23P36406 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM23P36406 GTF2IP8-201ENST00000560687 584 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 MTND3P13-201ENST00000574391 343 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM23P36406 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM23P36406 AC067852.3-201ENST00000589177 561 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM23P36406 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM23P36406 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM23P36406 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM23P36406 MTND2P41-201ENST00000637599 773 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM23P36406 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM23P36406 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
TRIM23P36406 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM23P36406 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM23P36406 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM23P36406 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TRIM23P36406 RNU6-989P-201ENST00000362756 107 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 Y_RNA.333-201ENST00000365274 102 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 SNORD82-201ENST00000365530 70 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 RNU6-413P-201ENST00000384115 107 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 SNORA51.6-201ENST00000384151 125 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM23P36406 AL024474.1-201ENST00000404655 591 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM23P36406 OR1AA1P-201ENST00000419597 916 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC005326.1-201ENST00000429197 123 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM23P36406 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 AC127537.2-201ENST00000439258 465 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 TRIM60P18-201ENST00000441518 828 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 MTCO2P25-201ENST00000447065 681 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
TRIM23P36406 AC010285.1-201ENST00000470580 392 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 RN7SL807P-201ENST00000470923 297 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC108734.3-201ENST00000481241 1165 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC013828.1-201ENST00000481845 158 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC134050.1-201ENST00000495088 933 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC093767.1-201ENST00000504523 156 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC114322.1-201ENST00000506771 926 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM23P36406 RNU6-1225P-201ENST00000516336 65 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM23P36406 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM23P36406 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC092954.1-201ENST00000609121 445 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM23P36406 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.38□□□□□ -1.87
TRIM23P36406 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM23P36406 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM23P36406 AC004925.1-201ENST00000624256 2706 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 AC116096.1-201ENST00000566804 2314 ntBASIC3.38□□□□□ -1.87
TRIM23P36406 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TRIM23P36406 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM23P36406 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM23P36406 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
TRIM23P36406 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM23P36406 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 AC073346.2-201ENST00000624724 2058 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM23P36406 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM23P36406 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM23P36406 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 Y_RNA.25-201ENST00000362528 102 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 RNA5SP258-201ENST00000362750 119 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 RNU6-1249P-201ENST00000363237 111 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 RNU6-216P-201ENST00000363282 104 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 RNU6-560P-201ENST00000364007 108 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 SNORA72.3-201ENST00000365074 132 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 DYNLT3P1-201ENST00000378574 347 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM23P36406 Y_RNA.472-201ENST00000384322 102 ntBASIC3.37□□□□□ -1.87
TRIM23P36406 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TRIM23P36406 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms