Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SNORA40.4-201ENST00000390971 128 ntBASIC3.06□□□□□ -1.92
RORAP35398 MCTS2P-201ENST00000394552 546 ntBASIC3.06□□□□□ -1.92
RORAP35398 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.06□□□□□ -1.92
RORAP35398 AL024507.1-201ENST00000412741 274 ntBASIC3.06□□□□□ -1.92
RORAP35398 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RORAP35398 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.06□□□□□ -1.92
RORAP35398 RPL31P54-201ENST00000429803 370 ntBASIC3.06□□□□□ -1.92
RORAP35398 CST9LP2-201ENST00000437612 320 ntBASIC3.06□□□□□ -1.92
RORAP35398 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.06□□□□□ -1.92
RORAP35398 SEPT14P24-201ENST00000447236 180 ntBASIC3.06□□□□□ -1.92
RORAP35398 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.06□□□□□ -1.92
RORAP35398 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.06□□□□□ -1.92
RORAP35398 AC104073.1-201ENST00000451988 151 ntBASIC3.06□□□□□ -1.92
RORAP35398 RN7SL863P-201ENST00000462370 296 ntBASIC3.06□□□□□ -1.92
RORAP35398 AC104472.2-201ENST00000469035 601 ntBASIC3.06□□□□□ -1.92
RORAP35398 AC108860.1-201ENST00000484521 383 ntBASIC3.06□□□□□ -1.92
RORAP35398 NAMPTP2-201ENST00000505629 1115 ntBASIC3.06□□□□□ -1.92
RORAP35398 AC091860.1-201ENST00000505723 432 ntBASIC3.06□□□□□ -1.92
RORAP35398 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.06□□□□□ -1.92
RORAP35398 POU5F1P7-201ENST00000508759 541 ntBASIC3.06□□□□□ -1.92
RORAP35398 RNU5A-7P-201ENST00000515979 116 ntBASIC3.06□□□□□ -1.92
RORAP35398 SNORA64.4-201ENST00000516632 81 ntBASIC3.06□□□□□ -1.92
RORAP35398 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.06□□□□□ -1.92
RORAP35398 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.06□□□□□ -1.92
RORAP35398 ERHP1-201ENST00000523006 310 ntBASIC3.06□□□□□ -1.92
RORAP35398 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.06□□□□□ -1.92
RORAP35398 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.06□□□□□ -1.92
RORAP35398 FAM35CP-201ENST00000554755 2470 ntBASIC3.06□□□□□ -1.92
RORAP35398 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.06□□□□□ -1.92
RORAP35398 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.06□□□□□ -1.92
RORAP35398 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.06□□□□□ -1.92
RORAP35398 COX6CP3-201ENST00000580869 223 ntBASIC3.06□□□□□ -1.92
RORAP35398 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.06□□□□□ -1.92
RORAP35398 AC002487.1-201ENST00000604565 994 ntBASIC3.06□□□□□ -1.92
RORAP35398 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RORAP35398 AC084824.5-201ENST00000612009 413 ntBASIC3.06□□□□□ -1.92
RORAP35398 AC138932.5-201ENST00000617759 563 ntBASIC3.06□□□□□ -1.92
RORAP35398 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.06□□□□□ -1.92
RORAP35398 AC095031.1-201ENST00000623685 672 ntBASIC3.06□□□□□ -1.92
RORAP35398 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.06□□□□□ -1.92
RORAP35398 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RORAP35398 ZNF807-201ENST00000328088 1707 ntBASIC3.05□□□□□ -1.92
RORAP35398 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RORAP35398 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RORAP35398 RNA5SP258-201ENST00000362750 119 ntBASIC3.05□□□□□ -1.92
RORAP35398 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.05□□□□□ -1.92
RORAP35398 RNU6-339P-201ENST00000384310 107 ntBASIC3.05□□□□□ -1.92
RORAP35398 RN7SKP123-201ENST00000410732 291 ntBASIC3.05□□□□□ -1.92
RORAP35398 AC007899.1-201ENST00000412776 775 ntBASIC3.05□□□□□ -1.92
RORAP35398 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.05□□□□□ -1.92
RORAP35398 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.05□□□□□ -1.92
RORAP35398 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.05□□□□□ -1.92
RORAP35398 S100A11P2-201ENST00000467589 312 ntBASIC3.05□□□□□ -1.92
RORAP35398 HMGB1P25-201ENST00000468402 607 ntBASIC3.05□□□□□ -1.92
RORAP35398 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.05□□□□□ -1.92
RORAP35398 AC015908.1-201ENST00000478739 476 ntBASIC3.05□□□□□ -1.92
RORAP35398 AC092902.1-201ENST00000486999 259 ntBASIC3.05□□□□□ -1.92
RORAP35398 OR5H5P-201ENST00000503164 928 ntBASIC3.05□□□□□ -1.92
RORAP35398 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RORAP35398 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
RORAP35398 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.05□□□□□ -1.92
RORAP35398 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.05□□□□□ -1.92
RORAP35398 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.05□□□□□ -1.92
RORAP35398 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.05□□□□□ -1.92
RORAP35398 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.05□□□□□ -1.92
RORAP35398 SNORD39.3-201ENST00000584451 71 ntBASIC3.05□□□□□ -1.92
RORAP35398 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.05□□□□□ -1.92
RORAP35398 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.05□□□□□ -1.92
RORAP35398 AC009220.3-201ENST00000604318 586 ntBASIC3.05□□□□□ -1.92
RORAP35398 VN1R7P-201ENST00000619242 903 ntBASIC3.05□□□□□ -1.92
RORAP35398 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.05□□□□□ -1.92
RORAP35398 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.05□□□□□ -1.92
RORAP35398 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RORAP35398 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.05□□□□□ -1.92
RORAP35398 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RORAP35398 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RORAP35398 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
RORAP35398 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RORAP35398 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.05□□□□□ -1.92
RORAP35398 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RORAP35398 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RORAP35398 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RORAP35398 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.04□□□□□ -1.92
RORAP35398 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.04□□□□□ -1.92
RORAP35398 RPL23AP57-201ENST00000332361 466 ntBASIC3.04□□□□□ -1.92
RORAP35398 SNORA7.4-201ENST00000384249 137 ntBASIC3.04□□□□□ -1.92
RORAP35398 RNU6-549P-201ENST00000384433 107 ntBASIC3.04□□□□□ -1.92
RORAP35398 SNORD116-23-201ENST00000384645 92 ntBASIC3.04□□□□□ -1.92
RORAP35398 TMSB4XP8-201ENST00000402089 135 ntBASIC3.04□□□□□ -1.92
RORAP35398 AL121978.1-201ENST00000402778 359 ntBASIC3.04□□□□□ -1.92
RORAP35398 AL139098.1-201ENST00000407291 389 ntBASIC3.04□□□□□ -1.92
RORAP35398 TMSB4XP6-201ENST00000415187 135 ntBASIC3.04□□□□□ -1.92
RORAP35398 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.04□□□□□ -1.92
RORAP35398 TMSB4XP1-201ENST00000424567 135 ntBASIC3.04□□□□□ -1.92
RORAP35398 MTATP6P4-201ENST00000427725 675 ntBASIC3.04□□□□□ -1.92
RORAP35398 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.04□□□□□ -1.92
RORAP35398 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.04□□□□□ -1.92
RORAP35398 AP000949.1-201ENST00000438328 629 ntBASIC3.04□□□□□ -1.92
RORAP35398 Z99127.3-201ENST00000448158 395 ntBASIC3.04□□□□□ -1.92
RORAP35398 RSL24D1P3-201ENST00000449255 495 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms