Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5□□□□□ -1.61
CNGA1P29973 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5□□□□□ -1.61
CNGA1P29973 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5□□□□□ -1.61
CNGA1P29973 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5□□□□□ -1.61
CNGA1P29973 AC012669.1-201ENST00000603209 283 ntBASIC5□□□□□ -1.61
CNGA1P29973 AC011468.4-201ENST00000603942 409 ntBASIC5□□□□□ -1.61
CNGA1P29973 AC011451.2-201ENST00000604303 598 ntBASIC5□□□□□ -1.61
CNGA1P29973 RNU6-87P-201ENST00000607561 108 ntBASIC5□□□□□ -1.61
CNGA1P29973 AC098614.4-201ENST00000607601 462 ntBASIC5□□□□□ -1.61
CNGA1P29973 AC091304.9-201ENST00000612091 226 ntBASIC5□□□□□ -1.61
CNGA1P29973 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5□□□□□ -1.61
CNGA1P29973 AC008498.1-201ENST00000613012 531 ntBASIC5□□□□□ -1.61
CNGA1P29973 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5□□□□□ -1.61
CNGA1P29973 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CNGA1P29973 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5□□□□□ -1.61
CNGA1P29973 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNGA1P29973 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5□□□□□ -1.61
CNGA1P29973 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.99□□□□□ -1.61
CNGA1P29973 MIR921-201ENST00000401133 56 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 SNORA11F-201ENST00000408237 128 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.99□□□□□ -1.61
CNGA1P29973 Y_RNA.599-201ENST00000410489 109 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AL160275.2-201ENST00000412010 394 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 HMGB3P23-201ENST00000414981 585 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 RWDD4P2-201ENST00000426392 563 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC009961.2-201ENST00000435771 251 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 Z74696.2-201ENST00000436514 498 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AL162151.2-201ENST00000448875 158 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 GAPDHP17-201ENST00000449858 1001 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.99□□□□□ -1.61
CNGA1P29973 RPL23AP41-201ENST00000484754 458 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AC055855.1-201ENST00000489563 579 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 RPL35P6-201ENST00000490024 372 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.99□□□□□ -1.61
CNGA1P29973 RPL37P25-201ENST00000507308 276 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CNGA1P29973 SNORA18.6-201ENST00000516792 115 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.99□□□□□ -1.61
CNGA1P29973 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.99□□□□□ -1.61
CNGA1P29973 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.99□□□□□ -1.61
CNGA1P29973 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.99□□□□□ -1.61
CNGA1P29973 AL356432.3-201ENST00000568952 465 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AC137800.2-201ENST00000574375 120 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 CKS1BP3-201ENST00000600888 237 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 DEFB131E-202ENST00000602581 683 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AC004492.1-201ENST00000607036 742 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AC103710.1-201ENST00000610003 901 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 MIR6867-201ENST00000610636 67 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 MIR6875-201ENST00000617506 72 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 AC010149.2-201ENST00000637608 315 ntBASIC4.99□□□□□ -1.61
CNGA1P29973 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CNGA1P29973 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNGA1P29973 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNGA1P29973 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CNGA1P29973 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNGA1P29973 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNGA1P29973 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNGA1P29973 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNGA1P29973 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNGA1P29973 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CNGA1P29973 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.98□□□□□ -1.61
CNGA1P29973 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNGA1P29973 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CNGA1P29973 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
CNGA1P29973 Y_RNA.3-201ENST00000362331 103 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 Y_RNA.41-201ENST00000362646 102 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 RNA5SP513-201ENST00000364648 118 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNGA1P29973 MIR3065-201ENST00000390137 79 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 Y_RNA.582-201ENST00000391023 95 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 CCNG1P1-201ENST00000406783 885 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 RN7SKP33-201ENST00000410942 340 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 AC244098.2-201ENST00000422068 99 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.98□□□□□ -1.61
CNGA1P29973 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.98□□□□□ -1.61
CNGA1P29973 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.98□□□□□ -1.61
CNGA1P29973 snoU13.22-201ENST00000459428 104 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 RPL7P15-201ENST00000461190 712 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.98□□□□□ -1.61
CNGA1P29973 AC012170.1-201ENST00000495139 359 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 AC008958.1-201ENST00000511047 682 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 RNA5SP446-201ENST00000515955 82 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 RNA5SP497-201ENST00000516081 97 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 RNU6-1095P-201ENST00000516148 108 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 RNA5SP143-201ENST00000516936 115 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.98□□□□□ -1.61
CNGA1P29973 AP003181.2-201ENST00000528941 181 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 AP000907.2-201ENST00000530827 353 ntBASIC4.98□□□□□ -1.61
CNGA1P29973 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.98□□□□□ -1.61
CNGA1P29973 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.98□□□□□ -1.61
CNGA1P29973 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.98□□□□□ -1.61
CNGA1P29973 MIR3913-1-201ENST00000577744 102 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms