Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.68□□□□□ -1.66
XPAP23025 RPS29P25-201ENST00000481709 171 ntBASIC4.68□□□□□ -1.66
XPAP23025 AC023194.1-201ENST00000493084 308 ntBASIC4.68□□□□□ -1.66
XPAP23025 AC111000.3-201ENST00000508057 576 ntBASIC4.68□□□□□ -1.66
XPAP23025 RNA5SP360-201ENST00000516555 118 ntBASIC4.68□□□□□ -1.66
XPAP23025 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.68□□□□□ -1.66
XPAP23025 AC022616.3-201ENST00000523940 148 ntBASIC4.68□□□□□ -1.66
XPAP23025 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.68□□□□□ -1.66
XPAP23025 RN7SL690P-201ENST00000582087 240 ntBASIC4.68□□□□□ -1.66
XPAP23025 AL049634.3-201ENST00000604968 457 ntBASIC4.68□□□□□ -1.66
XPAP23025 AC019193.2-201ENST00000610012 634 ntBASIC4.68□□□□□ -1.66
XPAP23025 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.68□□□□□ -1.66
XPAP23025 CR381572.1-201ENST00000625098 102 ntBASIC4.68□□□□□ -1.66
XPAP23025 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.68□□□□□ -1.66
XPAP23025 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.68□□□□□ -1.66
XPAP23025 AC025031.4-201ENST00000621248 3271 ntBASIC4.68□□□□□ -1.66
XPAP23025 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
XPAP23025 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
XPAP23025 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XPAP23025 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XPAP23025 NMD3P1-201ENST00000439704 1488 ntBASIC4.68□□□□□ -1.66
XPAP23025 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XPAP23025 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
XPAP23025 SAGE4P-201ENST00000442271 3381 ntBASIC4.67□□□□□ -1.66
XPAP23025 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.67□□□□□ -1.66
XPAP23025 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 AL359893.1-201ENST00000447628 1580 ntBASIC4.67□□□□□ -1.66
XPAP23025 DHX40P1-201ENST00000588725 1412 ntBASIC4.67□□□□□ -1.66
XPAP23025 MAPK10-303ENST00000641324 3959 ntBASIC4.67□□□□□ -1.66
XPAP23025 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 RNU6-169P-201ENST00000365336 107 ntBASIC4.67□□□□□ -1.66
XPAP23025 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 SNORA20.2-201ENST00000383922 131 ntBASIC4.67□□□□□ -1.66
XPAP23025 RNA5SP397-201ENST00000391323 118 ntBASIC4.67□□□□□ -1.66
XPAP23025 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 RN7SKP216-201ENST00000411050 312 ntBASIC4.67□□□□□ -1.66
XPAP23025 RPL31P2-201ENST00000413849 377 ntBASIC4.67□□□□□ -1.66
XPAP23025 CKS1BP6-201ENST00000424932 240 ntBASIC4.67□□□□□ -1.66
XPAP23025 ZNF863P-201ENST00000426746 417 ntBASIC4.67□□□□□ -1.66
XPAP23025 RPS15AP9-201ENST00000439856 381 ntBASIC4.67□□□□□ -1.66
XPAP23025 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AC011753.3-201ENST00000443436 406 ntBASIC4.67□□□□□ -1.66
XPAP23025 RPL23AP20-201ENST00000447965 421 ntBASIC4.67□□□□□ -1.66
XPAP23025 MTND3P10-201ENST00000450967 341 ntBASIC4.67□□□□□ -1.66
XPAP23025 AL353691.1-201ENST00000451332 387 ntBASIC4.67□□□□□ -1.66
XPAP23025 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.67□□□□□ -1.66
XPAP23025 RPL36AP41-201ENST00000493820 306 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC020893.1-201ENST00000502452 580 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC008628.2-201ENST00000502605 298 ntBASIC4.67□□□□□ -1.66
XPAP23025 AK3P4-201ENST00000504283 583 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.67□□□□□ -1.66
XPAP23025 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.67□□□□□ -1.66
XPAP23025 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AC005798.1-201ENST00000513715 387 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AP001646.1-201ENST00000527936 915 ntBASIC4.67□□□□□ -1.66
XPAP23025 OR4P1P-201ENST00000530808 1136 ntBASIC4.67□□□□□ -1.66
XPAP23025 OR8L1P-201ENST00000534005 955 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AC090616.5-202ENST00000582111 297 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC209154.1-201ENST00000582156 337 ntBASIC4.67□□□□□ -1.66
XPAP23025 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.67□□□□□ -1.66
XPAP23025 AC073091.2-201ENST00000603205 907 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC004853.1-201ENST00000604902 698 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC009994.1-201ENST00000606889 253 ntBASIC4.67□□□□□ -1.66
XPAP23025 AC093788.1-201ENST00000609356 927 ntBASIC4.67□□□□□ -1.66
XPAP23025 uc_338.18-201ENST00000615451 175 ntBASIC4.67□□□□□ -1.66
XPAP23025 AP005264.7-201ENST00000625003 745 ntBASIC4.67□□□□□ -1.66
XPAP23025 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.67□□□□□ -1.66
XPAP23025 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.67□□□□□ -1.66
XPAP23025 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 PNPT1P2-201ENST00000456768 2050 ntBASIC4.67□□□□□ -1.66
XPAP23025 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
XPAP23025 AC000374.1-201ENST00000434698 1745 ntBASIC4.66□□□□□ -1.66
XPAP23025 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
XPAP23025 AL133412.1-201ENST00000380194 2992 ntBASIC4.66□□□□□ -1.66
XPAP23025 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
XPAP23025 LINC00622-201ENST00000562811 1570 ntBASIC4.66□□□□□ -1.66
XPAP23025 AC017104.4-201ENST00000636283 1592 ntBASIC4.66□□□□□ -1.66
XPAP23025 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.66□□□□□ -1.66
XPAP23025 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.66□□□□□ -1.66
XPAP23025 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
XPAP23025 SNORD113.2-201ENST00000364166 89 ntBASIC4.66□□□□□ -1.66
XPAP23025 RNVU1-3-201ENST00000364313 161 ntBASIC4.66□□□□□ -1.66
XPAP23025 RNU6-456P-201ENST00000384493 107 ntBASIC4.66□□□□□ -1.66
XPAP23025 Y_RNA.573-201ENST00000384763 105 ntBASIC4.66□□□□□ -1.66
XPAP23025 RNA5SP332-201ENST00000391063 115 ntBASIC4.66□□□□□ -1.66
XPAP23025 AL603766.1-201ENST00000407763 664 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms