Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC138915.3-201ENST00000562908 1389 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC004925.1-201ENST00000624256 2706 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL5A1P20908 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 AL161781.1-201ENST00000354277 403 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 SNORA63.3-201ENST00000362682 132 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AL035405.1-201ENST00000400795 710 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC098592.2-201ENST00000413158 265 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 RPL7P53-201ENST00000421245 739 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.45□□□□□ -2.02
COL5A1P20908 ARF4P2-201ENST00000430209 526 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 RAB9AP5-201ENST00000437794 597 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 RAB9AP2-201ENST00000443911 597 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.45□□□□□ -2.02
COL5A1P20908 GAPDHP27-201ENST00000447427 1020 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.45□□□□□ -2.02
COL5A1P20908 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.45□□□□□ -2.02
COL5A1P20908 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC119751.4-201ENST00000507498 357 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC010468.3-201ENST00000508225 458 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 HMGB1P47-201ENST00000511281 589 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 C1DP5-201ENST00000525775 383 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 OR8L1P-201ENST00000534005 955 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL5A1P20908 AL133271.1-201ENST00000538229 291 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 ELOCP31-201ENST00000540463 467 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 CKS1BP1-201ENST00000555221 240 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC233266.2-201ENST00000567067 528 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
COL5A1P20908 AP004372.1-201ENST00000604842 844 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AL391834.1-201ENST00000609609 560 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC097460.3-201ENST00000623099 442 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL5A1P20908 AC010608.3-201ENST00000625048 527 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 PISRT1-201ENST00000626175 531 ntBASIC2.45□□□□□ -2.02
COL5A1P20908 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL5A1P20908 MAPK10-322ENST00000641485 4530 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC087565.3-202ENST00000642085 1603 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
COL5A1P20908 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL5A1P20908 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.44□□□□□ -2.02
COL5A1P20908 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL5A1P20908 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.44□□□□□ -2.02
COL5A1P20908 SNORD114-1-201ENST00000362705 72 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 Z86062.1-201ENST00000406773 777 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 RNU4-27P-201ENST00000410889 139 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.44□□□□□ -2.02
COL5A1P20908 AL512637.2-201ENST00000431287 1256 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AL353597.2-202ENST00000434901 373 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 ELOCP10-201ENST00000440624 327 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AL513321.1-201ENST00000441175 761 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 BUD31P2-201ENST00000449374 300 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.44□□□□□ -2.02
COL5A1P20908 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.44□□□□□ -2.02
COL5A1P20908 MTCO3P27-201ENST00000514397 196 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC034244.2-201ENST00000514668 858 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.44□□□□□ -2.02
COL5A1P20908 AC068446.3-201ENST00000555285 382 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.44□□□□□ -2.02
COL5A1P20908 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.44□□□□□ -2.02
COL5A1P20908 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.44□□□□□ -2.02
COL5A1P20908 MIR4760-201ENST00000585040 80 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.44□□□□□ -2.02
COL5A1P20908 ELOCP34-201ENST00000604436 327 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC026741.1-201ENST00000605892 482 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC067838.1-201ENST00000606064 577 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AL159169.2-201ENST00000610061 1269 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC022306.3-201ENST00000619930 550 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 Z99129.2-201ENST00000619967 314 ntBASIC2.44□□□□□ -2.02
COL5A1P20908 AC009487.2-201ENST00000420969 6821 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL5A1P20908 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL5A1P20908 MIR620-201ENST00000385232 95 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AC080125.1-201ENST00000414888 684 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.43□□□□□ -2.02
COL5A1P20908 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.43□□□□□ -2.02
COL5A1P20908 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.43□□□□□ -2.02
COL5A1P20908 AL035551.1-201ENST00000446931 348 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 HMGN1P5-201ENST00000448591 263 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AC090543.1-201ENST00000492168 485 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL5A1P20908 AC010265.1-201ENST00000513509 211 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 RN7SKP24-201ENST00000515888 284 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 IGKV2-36-201ENST00000519999 223 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AC010376.1-201ENST00000522101 334 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.43□□□□□ -2.02
COL5A1P20908 AL121839.1-201ENST00000556233 1185 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AC068313.1-201ENST00000604028 1008 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.43□□□□□ -2.02
COL5A1P20908 AC107871.2-201ENST00000612894 502 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 AC123768.4-201ENST00000616244 701 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 U4.3-201ENST00000621047 82 ntBASIC2.43□□□□□ -2.02
COL5A1P20908 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms