Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.24□□□□□ -1.89
XRCC1P18887 SDR42E1P3-201ENST00000438345 502 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 AC079776.3-201ENST00000450665 370 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC021678.1-201ENST00000505195 936 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC093752.1-206ENST00000511823 336 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AP004371.1-201ENST00000525240 214 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 MTCYBP41-201ENST00000528913 1123 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
XRCC1P18887 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 AC015917.1-201ENST00000579654 510 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC073657.2-201ENST00000605661 303 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC069545.1-201ENST00000605671 358 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC091946.2-201ENST00000606105 291 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.24□□□□□ -1.89
XRCC1P18887 MIR7112-201ENST00000616126 65 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC010975.3-201ENST00000618727 978 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.24□□□□□ -1.89
XRCC1P18887 AC022306.3-201ENST00000619930 550 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.24□□□□□ -1.89
XRCC1P18887 AC092184.1-201ENST00000625042 715 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.24□□□□□ -1.89
XRCC1P18887 MTND2P41-201ENST00000637599 773 ntBASIC3.24□□□□□ -1.89
XRCC1P18887 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.24□□□□□ -1.89
XRCC1P18887 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
XRCC1P18887 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.24□□□□□ -1.89
XRCC1P18887 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.23□□□□□ -1.89
XRCC1P18887 AL645568.2-201ENST00000432815 1337 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 SNORA38.1-201ENST00000364172 131 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
XRCC1P18887 MIR491-201ENST00000384877 84 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 RNU6-821P-201ENST00000390995 107 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 RNU2-28P-201ENST00000410457 189 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 MTND2P16-201ENST00000419987 799 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 FNDC3CP-201ENST00000420795 1155 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AC127537.2-201ENST00000439258 465 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AC093155.1-201ENST00000440164 826 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 ATP5C1P1-201ENST00000441945 895 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.23□□□□□ -1.89
XRCC1P18887 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.23□□□□□ -1.89
XRCC1P18887 AC093767.1-201ENST00000504523 156 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 AC026427.2-201ENST00000506228 536 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 RNU6-1261P-201ENST00000517194 104 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
XRCC1P18887 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.23□□□□□ -1.89
XRCC1P18887 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.23□□□□□ -1.89
XRCC1P18887 AC090502.2-201ENST00000549267 280 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AC010198.2-201ENST00000550612 259 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.23□□□□□ -1.89
XRCC1P18887 AC005476.1-201ENST00000554427 397 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.23□□□□□ -1.89
XRCC1P18887 AL606834.2-201ENST00000602954 668 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AC009237.15-201ENST00000610252 501 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 AP005901.5-201ENST00000545779 1796 ntBASIC3.23□□□□□ -1.89
XRCC1P18887 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
XRCC1P18887 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.22□□□□□ -1.89
XRCC1P18887 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
XRCC1P18887 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.22□□□□□ -1.89
XRCC1P18887 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
XRCC1P18887 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
XRCC1P18887 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
XRCC1P18887 RNU6-1181P-201ENST00000384191 106 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 RNU4-47P-201ENST00000410876 114 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 RNU4-78P-201ENST00000410940 126 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.22□□□□□ -1.89
XRCC1P18887 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.22□□□□□ -1.89
XRCC1P18887 AC007435.1-201ENST00000421086 415 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC012497.1-201ENST00000429392 575 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC006028.1-201ENST00000438379 402 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 MTATP6P14-201ENST00000455189 673 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 RPS20P24-201ENST00000457473 361 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 RPL7P38-201ENST00000488396 739 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC092185.1-201ENST00000491371 97 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC096571.1-202ENST00000506634 735 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 AC113347.3-201ENST00000509113 148 ntBASIC3.22□□□□□ -1.89
XRCC1P18887 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.22□□□□□ -1.89
XRCC1P18887 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms