| MUC1 | P15941 | RNU6-236P-201 | ENST00000363886 | 106 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RNU6-619P-201 | ENST00000365146 | 108 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | OR8B2-201 | ENST00000375013 | 942 nt | APPRIS P1 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | FAM107B-204 | ENST00000378465 | 1052 nt | APPRIS P1 TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | MIR181B1-201 | ENST00000385240 | 110 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPL21P75-201 | ENST00000396599 | 483 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPL21P28-201 | ENST00000401418 | 483 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AL592114.1-201 | ENST00000403842 | 483 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPL7P25-201 | ENST00000404151 | 721 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | CoTC_ribozyme.1-201 | ENST00000408104 | 192 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPS7P9-201 | ENST00000414704 | 586 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC003659.1-201 | ENST00000424251 | 465 nt | TSL 5 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | C1orf195-201 | ENST00000424792 | 255 nt | TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AL731684.2-201 | ENST00000426839 | 333 nt | TSL 5 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPL36P19-201 | ENST00000430744 | 301 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | ZFY-AS1-202 | ENST00000431145 | 419 nt | TSL 3 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | CLEC5A-202 | ENST00000438351 | 743 nt | TSL 3 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | MAP3K13-207 | ENST00000438798 | 388 nt | TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | PTGES3P1-201 | ENST00000439531 | 483 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC018495.1-201 | ENST00000440266 | 452 nt | TSL 3 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | LINC01004-201 | ENST00000445184 | 686 nt | TSL 5 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | SPANXN4-202 | ENST00000446864 | 431 nt | APPRIS P2 TSL 1 (best) BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC104978.1-201 | ENST00000449387 | 391 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | GSTA11P-201 | ENST00000452866 | 669 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | snoU13.7-201 | ENST00000459220 | 104 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPL21P39-201 | ENST00000463605 | 483 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | VN1R17P-201 | ENST00000472048 | 1090 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC011979.1-201 | ENST00000472300 | 483 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPL21P93-201 | ENST00000480465 | 489 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC233702.1-201 | ENST00000482905 | 502 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RAD51AP1P1-201 | ENST00000484195 | 1001 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC087190.1-201 | ENST00000484462 | 480 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AP001025.2-201 | ENST00000490908 | 477 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC093591.1-201 | ENST00000491435 | 481 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | SATB1-216 | ENST00000491519 | 1000 nt | TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | MGAT4A-209 | ENST00000495056 | 683 nt | TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RPL21P16-201 | ENST00000495531 | 483 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC011352.3-201 | ENST00000505162 | 593 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC008780.2-201 | ENST00000509844 | 820 nt | TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC008837.1-201 | ENST00000511513 | 412 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC109471.1-201 | ENST00000511631 | 612 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RNU6-276P-201 | ENST00000516114 | 96 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RNU6-56P-201 | ENST00000516986 | 93 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | snoZ278.1-201 | ENST00000517059 | 112 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC010376.1-201 | ENST00000522101 | 334 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RGS4-207 | ENST00000527809 | 817 nt | TSL 4 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | MTND2P26-201 | ENST00000528255 | 1029 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | NDUFS5P6-201 | ENST00000529136 | 295 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC084838.1-201 | ENST00000532973 | 312 nt | TSL 3 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | UNC13C-202 | ENST00000539562 | 938 nt | TSL 1 (best) BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC078962.4-201 | ENST00000546135 | 254 nt | TSL 3 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | SERPINE4P-201 | ENST00000554978 | 281 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC090607.1-201 | ENST00000560057 | 449 nt | TSL 3 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | MTCO3P13-201 | ENST00000577757 | 781 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC017100.2-201 | ENST00000584628 | 355 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC091057.3-201 | ENST00000602684 | 733 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC007179.3-201 | ENST00000604976 | 235 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AP000238.1-201 | ENST00000608759 | 426 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC107871.2-201 | ENST00000612894 | 502 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC231759.1-201 | ENST00000616455 | 597 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | MIR6864-201 | ENST00000617935 | 70 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC099506.2-201 | ENST00000623074 | 221 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC110491.2-201 | ENST00000624061 | 646 nt | TSL 5 BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | ZNF33CP-201 | ENST00000432492 | 2030 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| MUC1 | P15941 | GABRG2-209 | ENST00000638660 | 3799 nt | TSL 5 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | GAPT-201 | ENST00000318469 | 2119 nt | APPRIS P1 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | CDK1-201 | ENST00000316629 | 1733 nt | TSL 5 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | MIS12-201 | ENST00000381165 | 2505 nt | APPRIS P1 TSL 1 (best) BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RNU5E-10P-201 | ENST00000363506 | 118 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | CNIH4-201 | ENST00000366856 | 808 nt | APPRIS ALT1 TSL 2 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | GSTA8P-201 | ENST00000404253 | 637 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AL354733.1-203 | ENST00000417672 | 495 nt | TSL 5 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC009237.2-201 | ENST00000421358 | 284 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AP001117.1-201 | ENST00000428205 | 609 nt | TSL 2 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AL513175.1-201 | ENST00000431492 | 780 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC010881.1-201 | ENST00000433830 | 235 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC108734.1-201 | ENST00000439549 | 399 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AL139230.1-201 | ENST00000440094 | 425 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AL591848.2-201 | ENST00000442712 | 522 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC098820.1-201 | ENST00000453157 | 512 nt | TSL 2 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | LINC01075-201 | ENST00000455977 | 370 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC004872.1-201 | ENST00000456062 | 469 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AF129075.1-201 | ENST00000457162 | 794 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AP004217.1-201 | ENST00000480579 | 346 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC118282.2-201 | ENST00000508739 | 374 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | RNU6-1028P-201 | ENST00000517164 | 93 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC091163.3-201 | ENST00000518269 | 1144 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC087623.1-201 | ENST00000533301 | 377 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC012170.3-201 | ENST00000560159 | 297 nt | TSL 2 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC012404.1-201 | ENST00000560876 | 476 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC134669.2-201 | ENST00000578584 | 1008 nt | APPRIS P1 TSL 2 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC118755.2-201 | ENST00000584676 | 212 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AC073387.2-201 | ENST00000604797 | 784 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | YPEL5P2-201 | ENST00000605553 | 359 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AL583856.2-201 | ENST00000606298 | 543 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AP005137.2-201 | ENST00000609238 | 400 nt | BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | LINC02098-202 | ENST00000609260 | 554 nt | TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | SCOC-203 | ENST00000394203 | 1999 nt | TSL 2 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | AGTR1-205 | ENST00000461609 | 1545 nt | APPRIS P1 TSL 3 BASIC | 2.63 | □□□□□ -1.99 | | |
| MUC1 | P15941 | DTHD1-205 | ENST00000507598 | 2606 nt | TSL 1 (best) BASIC | 2.62 | □□□□□ -1.99 | | |