Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TPM1P09493 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.08□□□□□ -1.92
TPM1P09493 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TPM1P09493 PTP4A1P3-201ENST00000433661 420 ntBASIC3.08□□□□□ -1.92
TPM1P09493 RPS20P5-201ENST00000434808 360 ntBASIC3.08□□□□□ -1.92
TPM1P09493 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM1P09493 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.08□□□□□ -1.92
TPM1P09493 DSTNP2-201ENST00000504533 515 ntBASIC3.08□□□□□ -1.92
TPM1P09493 WBP1LP4-201ENST00000505043 344 ntBASIC3.08□□□□□ -1.92
TPM1P09493 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TPM1P09493 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TPM1P09493 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TPM1P09493 OR10V3P-201ENST00000525712 725 ntBASIC3.08□□□□□ -1.92
TPM1P09493 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.08□□□□□ -1.92
TPM1P09493 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM1P09493 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.08□□□□□ -1.92
TPM1P09493 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM1P09493 AC060766.3-201ENST00000591442 263 ntBASIC3.08□□□□□ -1.92
TPM1P09493 BX322635.1-201ENST00000605804 496 ntBASIC3.08□□□□□ -1.92
TPM1P09493 AC069200.1-201ENST00000609511 323 ntBASIC3.08□□□□□ -1.92
TPM1P09493 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM1P09493 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM1P09493 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM1P09493 AC080100.1-201ENST00000624239 5356 ntBASIC3.08□□□□□ -1.92
TPM1P09493 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.08□□□□□ -1.92
TPM1P09493 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TPM1P09493 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TPM1P09493 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TPM1P09493 RNU1-85P-201ENST00000364127 164 ntBASIC3.07□□□□□ -1.92
TPM1P09493 RNU6-921P-201ENST00000384361 107 ntBASIC3.07□□□□□ -1.92
TPM1P09493 MIR649-201ENST00000384843 97 ntBASIC3.07□□□□□ -1.92
TPM1P09493 UBE2V1P11-201ENST00000411559 285 ntBASIC3.07□□□□□ -1.92
TPM1P09493 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AL645937.1-202ENST00000421799 937 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AL513175.2-201ENST00000422071 443 ntBASIC3.07□□□□□ -1.92
TPM1P09493 PNRC2P1-201ENST00000423940 420 ntBASIC3.07□□□□□ -1.92
TPM1P09493 RPP40P1-201ENST00000426762 456 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.07□□□□□ -1.92
TPM1P09493 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.07□□□□□ -1.92
TPM1P09493 MTND2P19-201ENST00000449129 1012 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC112492.1-201ENST00000449607 712 ntBASIC3.07□□□□□ -1.92
TPM1P09493 NIPA2P5-201ENST00000452282 464 ntBASIC3.07□□□□□ -1.92
TPM1P09493 RPL23AP23-201ENST00000452590 471 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC027673.1-201ENST00000456245 405 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.07□□□□□ -1.92
TPM1P09493 AC003982.1-202ENST00000469928 248 ntBASIC3.07□□□□□ -1.92
TPM1P09493 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM1P09493 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM1P09493 SCGB1D5P-201ENST00000515134 247 ntBASIC3.07□□□□□ -1.92
TPM1P09493 SNORA31.15-201ENST00000516771 132 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC025881.1-201ENST00000518851 512 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.07□□□□□ -1.92
TPM1P09493 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.07□□□□□ -1.92
TPM1P09493 AL133271.1-201ENST00000538229 291 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.07□□□□□ -1.92
TPM1P09493 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM1P09493 AC020895.1-201ENST00000595362 272 ntBASIC3.07□□□□□ -1.92
TPM1P09493 VN1R88P-201ENST00000596787 292 ntBASIC3.07□□□□□ -1.92
TPM1P09493 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TPM1P09493 AC005046.1-201ENST00000608515 625 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC106028.5-201ENST00000610332 395 ntBASIC3.07□□□□□ -1.92
TPM1P09493 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.07□□□□□ -1.92
TPM1P09493 BX649567.1-201ENST00000642071 1134 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC007342.9-201ENST00000623877 1385 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AC096644.4-201ENST00000563417 2912 ntBASIC3.07□□□□□ -1.92
TPM1P09493 AL049780.3-201ENST00000624612 1583 ntBASIC3.07□□□□□ -1.92
TPM1P09493 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM1P09493 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
TPM1P09493 SNORA25.6-201ENST00000364121 118 ntBASIC3.06□□□□□ -1.92
TPM1P09493 RNA5SP139-201ENST00000364340 117 ntBASIC3.06□□□□□ -1.92
TPM1P09493 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TPM1P09493 RPS15AP38-201ENST00000413110 372 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM1P09493 AC069157.1-201ENST00000421749 137 ntBASIC3.06□□□□□ -1.92
TPM1P09493 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.06□□□□□ -1.92
TPM1P09493 AL050321.1-201ENST00000432363 400 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM1P09493 AL591503.2-201ENST00000442314 1005 ntBASIC3.06□□□□□ -1.92
TPM1P09493 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM1P09493 RPS4XP10-201ENST00000465034 731 ntBASIC3.06□□□□□ -1.92
TPM1P09493 SETP11-201ENST00000473027 690 ntBASIC3.06□□□□□ -1.92
TPM1P09493 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM1P09493 RPL21P131-201ENST00000497298 483 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC009901.1-201ENST00000506703 541 ntBASIC3.06□□□□□ -1.92
TPM1P09493 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM1P09493 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM1P09493 AC008885.1-201ENST00000514930 301 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC009812.2-201ENST00000517657 457 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM1P09493 AC087373.1-201ENST00000524920 491 ntBASIC3.06□□□□□ -1.92
TPM1P09493 PSMA2P1-201ENST00000526365 646 ntBASIC3.06□□□□□ -1.92
TPM1P09493 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TPM1P09493 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TPM1P09493 H3F3AP1-201ENST00000559984 334 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC138915.1-201ENST00000565427 1685 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC074051.3-201ENST00000570238 358 ntBASIC3.06□□□□□ -1.92
TPM1P09493 FAM60BP-201ENST00000578364 658 ntBASIC3.06□□□□□ -1.92
TPM1P09493 MIR5004-201ENST00000579078 107 ntBASIC3.06□□□□□ -1.92
TPM1P09493 AC138761.3-201ENST00000579993 334 ntBASIC3.06□□□□□ -1.92
TPM1P09493 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms