Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RNU6-224P-201ENST00000384055 107 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 HMGB1P10-201ENST00000395823 563 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 HNRNPDP2-201ENST00000406475 478 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 AL008987.1-201ENST00000415528 237 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 RPS3AP37-201ENST00000419176 745 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AL513175.2-201ENST00000422071 443 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 RPS6P12-201ENST00000432491 726 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.69□□□□□ -1.82
COL5A2P05997 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.69□□□□□ -1.82
COL5A2P05997 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.69□□□□□ -1.82
COL5A2P05997 PTENP1-201ENST00000447117 1215 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 RPS20P32-201ENST00000456044 356 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A2P05997 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.69□□□□□ -1.82
COL5A2P05997 SNORA3.4-201ENST00000515969 96 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 RNA5SP148-201ENST00000516527 94 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 SNORA31.21-201ENST00000517180 77 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 AC087897.1-201ENST00000550134 156 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.69□□□□□ -1.82
COL5A2P05997 AC023813.2-201ENST00000564321 469 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AC009094.1-201ENST00000564443 426 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 MIR4769-201ENST00000584126 77 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.69□□□□□ -1.82
COL5A2P05997 MTND3P19-201ENST00000603825 345 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 AC096586.1-201ENST00000610267 561 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.69□□□□□ -1.82
COL5A2P05997 AL512506.2-201ENST00000624472 458 ntBASIC3.69□□□□□ -1.82
COL5A2P05997 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.69□□□□□ -1.82
COL5A2P05997 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.69□□□□□ -1.82
COL5A2P05997 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A2P05997 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL5A2P05997 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.69□□□□□ -1.82
COL5A2P05997 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
COL5A2P05997 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A2P05997 SNORD116-1-201ENST00000384335 95 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 MIR142-201ENST00000384835 87 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A2P05997 SNORA3.2-201ENST00000408221 125 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC105402.1-201ENST00000413336 545 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 RPL30P2-201ENST00000414021 291 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 BTF3P8-201ENST00000414577 526 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 RPL32P35-201ENST00000415214 394 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A2P05997 AC023128.2-201ENST00000420880 1223 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC246680.2-201ENST00000422106 389 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.68□□□□□ -1.82
COL5A2P05997 USP9YP11-201ENST00000427537 717 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 RPL23AP4-201ENST00000427757 463 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.68□□□□□ -1.82
COL5A2P05997 RPS20P5-201ENST00000434808 360 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.68□□□□□ -1.82
COL5A2P05997 AC009263.1-201ENST00000441193 1239 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A2P05997 AC068135.1-201ENST00000446164 246 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AL589880.1-201ENST00000448271 287 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 ART2BP-201ENST00000453501 499 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.68□□□□□ -1.82
COL5A2P05997 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A2P05997 PRELID3BP7-201ENST00000503606 469 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 ANXA2P1-201ENST00000505539 926 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC104417.1-201ENST00000523974 751 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AP001646.1-201ENST00000527936 915 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC011611.5-201ENST00000552477 578 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 MIR4644-201ENST00000579929 84 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 PIGPP4-201ENST00000584447 307 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC110760.3-201ENST00000598794 467 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 BDH2P1-201ENST00000602288 736 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 MTCO2P22-201ENST00000603246 681 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AL133507.1-201ENST00000605269 557 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A2P05997 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.68□□□□□ -1.82
COL5A2P05997 AC009090.3-201ENST00000616553 565 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC123767.1-202ENST00000620407 817 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 MIR3974-201ENST00000637126 96 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC007336.1-201ENST00000576365 3828 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 AC116096.1-201ENST00000566804 2314 ntBASIC3.68□□□□□ -1.82
COL5A2P05997 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A2P05997 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL5A2P05997 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
COL5A2P05997 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL5A2P05997 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.68□□□□□ -1.82
COL5A2P05997 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A2P05997 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A2P05997 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
COL5A2P05997 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL5A2P05997 RNA5SP274-201ENST00000410484 108 ntBASIC3.67□□□□□ -1.82
COL5A2P05997 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.67□□□□□ -1.82
COL5A2P05997 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.67□□□□□ -1.82
COL5A2P05997 AC009302.1-201ENST00000417147 390 ntBASIC3.67□□□□□ -1.82
COL5A2P05997 AC006960.1-201ENST00000419980 153 ntBASIC3.67□□□□□ -1.82
COL5A2P05997 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms