Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3O95983 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3O95983 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3O95983 RNU6-492P-201ENST00000363035 104 ntBASIC3.35□□□□□ -1.87
MBD3O95983 RNU6-1249P-201ENST00000363237 111 ntBASIC3.35□□□□□ -1.87
MBD3O95983 U8.9-201ENST00000365667 134 ntBASIC3.35□□□□□ -1.87
MBD3O95983 MIR512-1-201ENST00000384913 84 ntBASIC3.35□□□□□ -1.87
MBD3O95983 MCTS2P-201ENST00000394552 546 ntBASIC3.35□□□□□ -1.87
MBD3O95983 TAF9BP1-201ENST00000396646 746 ntBASIC3.35□□□□□ -1.87
MBD3O95983 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3O95983 MTCO1P56-201ENST00000401674 224 ntBASIC3.35□□□□□ -1.87
MBD3O95983 CYCSP19-201ENST00000411715 316 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC092634.6-201ENST00000418558 192 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3O95983 USP9YP21-201ENST00000420603 432 ntBASIC3.35□□□□□ -1.87
MBD3O95983 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3O95983 Z95327.1-201ENST00000446082 482 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AL162389.1-201ENST00000449233 177 ntBASIC3.35□□□□□ -1.87
MBD3O95983 SSXP4-201ENST00000451349 245 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.35□□□□□ -1.87
MBD3O95983 HMGB1P15-201ENST00000453854 435 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC008427.1-201ENST00000503102 655 ntBASIC3.35□□□□□ -1.87
MBD3O95983 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3O95983 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.35□□□□□ -1.87
MBD3O95983 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3O95983 FAM60DP-201ENST00000524174 632 ntBASIC3.35□□□□□ -1.87
MBD3O95983 MTCO3P15-201ENST00000526563 574 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC068339.2-201ENST00000534395 618 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC087897.1-201ENST00000550134 156 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3O95983 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.35□□□□□ -1.87
MBD3O95983 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3O95983 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3O95983 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.35□□□□□ -1.87
MBD3O95983 AC068620.3-201ENST00000602749 560 ntBASIC3.35□□□□□ -1.87
MBD3O95983 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC002076.2-201ENST00000617362 122 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AL590240.3-201ENST00000621416 943 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.35□□□□□ -1.87
MBD3O95983 AC091953.5-201ENST00000622919 233 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AC018692.3-201ENST00000623929 123 ntBASIC3.35□□□□□ -1.87
MBD3O95983 AP003476.1-201ENST00000623984 516 ntBASIC3.35□□□□□ -1.87
MBD3O95983 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
MBD3O95983 AC080100.1-201ENST00000624239 5356 ntBASIC3.34□□□□□ -1.87
MBD3O95983 FAM35BP-202ENST00000497389 3337 ntBASIC3.34□□□□□ -1.87
MBD3O95983 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3O95983 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.34□□□□□ -1.87
MBD3O95983 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
MBD3O95983 MIR22-201ENST00000362190 85 ntBASIC3.34□□□□□ -1.87
MBD3O95983 DEFB109C-201ENST00000382575 264 ntBASIC3.34□□□□□ -1.87
MBD3O95983 DEFB109B-201ENST00000382656 264 ntBASIC3.34□□□□□ -1.87
MBD3O95983 MIR506-201ENST00000384998 124 ntBASIC3.34□□□□□ -1.87
MBD3O95983 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.34□□□□□ -1.87
MBD3O95983 RNU6ATAC-201ENST00000408749 126 ntBASIC3.34□□□□□ -1.87
MBD3O95983 RN7SKP263-201ENST00000411194 309 ntBASIC3.34□□□□□ -1.87
MBD3O95983 RPF2P1-201ENST00000424137 906 ntBASIC3.34□□□□□ -1.87
MBD3O95983 RAC1P8-201ENST00000427086 527 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AL035410.1-201ENST00000427409 427 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3O95983 AC092393.1-201ENST00000439625 742 ntBASIC3.34□□□□□ -1.87
MBD3O95983 MTCYBP42-201ENST00000444653 1130 ntBASIC3.34□□□□□ -1.87
MBD3O95983 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3O95983 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3O95983 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MBD3O95983 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AC093767.1-201ENST00000504523 156 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 RNA5SP468-201ENST00000516782 93 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.34□□□□□ -1.87
MBD3O95983 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
MBD3O95983 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
MBD3O95983 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3O95983 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.34□□□□□ -1.87
MBD3O95983 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.34□□□□□ -1.87
MBD3O95983 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3O95983 AC090666.1-201ENST00000578241 445 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AL627309.6-201ENST00000606857 840 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AL159169.3-201ENST00000608871 561 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AC006329.2-201ENST00000611491 394 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AL355493.4-201ENST00000618530 292 ntBASIC3.34□□□□□ -1.87
MBD3O95983 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.34□□□□□ -1.87
MBD3O95983 AC080188.3-201ENST00000624842 748 ntBASIC3.34□□□□□ -1.87
MBD3O95983 AP003485.1-201ENST00000625093 753 ntBASIC3.34□□□□□ -1.87
MBD3O95983 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
MBD3O95983 AC118273.1-201ENST00000525324 3006 ntBASIC3.34□□□□□ -1.88
MBD3O95983 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.34□□□□□ -1.88
MBD3O95983 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
MBD3O95983 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
MBD3O95983 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
MBD3O95983 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3O95983 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3O95983 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MBD3O95983 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms