Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MIR148B-201ENST00000362252 99 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 RNU6-492P-201ENST00000363035 104 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 RNU6-1066P-201ENST00000363573 105 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 U3.6-201ENST00000363622 211 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN9O95484 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AL591034.1-201ENST00000407447 340 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC109780.2-201ENST00000413467 845 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN9O95484 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN9O95484 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN9O95484 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 GDI2P1-201ENST00000429312 1336 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AL159987.2-201ENST00000432754 307 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 HMGB3P6-201ENST00000444896 598 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN9O95484 RPS23P3-201ENST00000470993 430 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC092902.1-201ENST00000486999 259 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC092185.1-201ENST00000491371 97 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN9O95484 BOLA3P3-201ENST00000505182 232 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN9O95484 GMPSP1-201ENST00000514075 579 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN9O95484 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN9O95484 AC092451.2-201ENST00000538746 658 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC090502.2-201ENST00000549267 280 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN9O95484 AC023825.1-201ENST00000566704 1030 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AL365400.2-201ENST00000605604 902 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC055876.5-201ENST00000605667 259 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AL583856.2-201ENST00000606298 543 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 AC015967.1-201ENST00000619893 476 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN9O95484 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN9O95484 AC118273.1-201ENST00000525324 3006 ntBASIC3.06□□□□□ -1.92
CLDN9O95484 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN9O95484 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN9O95484 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN9O95484 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN9O95484 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN9O95484 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 DUTP6-201ENST00000425573 462 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 AC097713.2-201ENST00000430199 356 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN9O95484 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.05□□□□□ -1.92
CLDN9O95484 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN9O95484 AC008481.1-201ENST00000463278 396 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 HSPD1P15-201ENST00000505573 1122 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 MLLT10P2-201ENST00000506434 249 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 AC105914.1-201ENST00000511798 226 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN9O95484 SNRPGP16-201ENST00000533275 226 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN9O95484 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN9O95484 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.05□□□□□ -1.92
CLDN9O95484 AC037471.2-201ENST00000564941 598 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 ELOCP35-201ENST00000604289 336 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 AL110115.1-201ENST00000614396 364 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 AC080188.3-201ENST00000624842 748 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 AC091925.2-201ENST00000625059 256 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 SCARNA15.3-201ENST00000626315 122 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN9O95484 SCARNA4.1-201ENST00000628597 123 ntBASIC3.05□□□□□ -1.92
CLDN9O95484 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN9O95484 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN9O95484 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CLDN9O95484 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN9O95484 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN9O95484 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN9O95484 MTCO1P23-201ENST00000415223 1526 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 AL136164.4-201ENST00000625013 2135 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CLDN9O95484 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 MIR34B-201ENST00000385076 84 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CLDN9O95484 RNU4-65P-201ENST00000410473 140 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN9O95484 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN9O95484 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN9O95484 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN9O95484 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN9O95484 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN9O95484 AC013262.1-201ENST00000426710 252 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 OR2AS1P-201ENST00000427827 319 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 AC092634.2-201ENST00000428146 1010 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN9O95484 HMGN2P20-201ENST00000437531 273 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 AC108734.1-201ENST00000439549 399 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
CLDN9O95484 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms