Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.79□□□□□ -1.8
GPC4O75487 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.79□□□□□ -1.8
GPC4O75487 RNU6-678P-201ENST00000516832 109 ntBASIC3.79□□□□□ -1.8
GPC4O75487 SUMO2P20-201ENST00000520803 283 ntBASIC3.79□□□□□ -1.8
GPC4O75487 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GPC4O75487 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.79□□□□□ -1.8
GPC4O75487 AC087373.1-201ENST00000524920 491 ntBASIC3.79□□□□□ -1.8
GPC4O75487 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.79□□□□□ -1.8
GPC4O75487 AC126177.3-201ENST00000551839 688 ntBASIC3.79□□□□□ -1.8
GPC4O75487 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GPC4O75487 AC090877.1-201ENST00000561418 344 ntBASIC3.79□□□□□ -1.8
GPC4O75487 AC012435.1-202ENST00000568772 240 ntBASIC3.79□□□□□ -1.8
GPC4O75487 MIR5186-201ENST00000577504 120 ntBASIC3.79□□□□□ -1.8
GPC4O75487 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.79□□□□□ -1.8
GPC4O75487 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
GPC4O75487 AL049634.3-201ENST00000604968 457 ntBASIC3.79□□□□□ -1.8
GPC4O75487 AC004223.4-201ENST00000612426 332 ntBASIC3.79□□□□□ -1.8
GPC4O75487 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.79□□□□□ -1.8
GPC4O75487 AL603755.1-201ENST00000619504 163 ntBASIC3.79□□□□□ -1.8
GPC4O75487 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.79□□□□□ -1.8
GPC4O75487 PCMTD1P7-201ENST00000634506 357 ntBASIC3.79□□□□□ -1.8
GPC4O75487 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.79□□□□□ -1.8
GPC4O75487 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GPC4O75487 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GPC4O75487 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GPC4O75487 CEP170P1-201ENST00000502249 4587 ntBASIC3.78□□□□□ -1.8
GPC4O75487 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GPC4O75487 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC4O75487 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GPC4O75487 RNU6-500P-201ENST00000362349 107 ntBASIC3.78□□□□□ -1.8
GPC4O75487 RNA5SP97-201ENST00000365006 84 ntBASIC3.78□□□□□ -1.8
GPC4O75487 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.78□□□□□ -1.8
GPC4O75487 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 SNORD116-8-201ENST00000384365 95 ntBASIC3.78□□□□□ -1.8
GPC4O75487 RNU6-712P-201ENST00000410558 100 ntBASIC3.78□□□□□ -1.8
GPC4O75487 RN7SKP263-201ENST00000411194 309 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC4O75487 SDCBPP1-201ENST00000440192 890 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GPC4O75487 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 Z95327.1-201ENST00000446082 482 ntBASIC3.78□□□□□ -1.8
GPC4O75487 NPM1P49-201ENST00000448027 714 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC4O75487 VN1R105P-201ENST00000486595 910 ntBASIC3.78□□□□□ -1.8
GPC4O75487 TRBV12-2-201ENST00000489763 344 ntBASIC3.78□□□□□ -1.8
GPC4O75487 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC4O75487 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC4O75487 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.78□□□□□ -1.8
GPC4O75487 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
GPC4O75487 RN7SL703P-201ENST00000578485 302 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.78□□□□□ -1.8
GPC4O75487 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.78□□□□□ -1.8
GPC4O75487 AC015726.1-201ENST00000602353 681 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AL109653.1-201ENST00000603091 248 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AC010738.1-201ENST00000604970 987 ntBASIC3.78□□□□□ -1.8
GPC4O75487 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.78□□□□□ -1.8
GPC4O75487 VIS1.1-201ENST00000610517 203 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AC012531.5-201ENST00000611375 151 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AL596245.1-201ENST00000618994 362 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AC092628.2-201ENST00000622492 339 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AC078883.4-201ENST00000623218 367 ntBASIC3.78□□□□□ -1.8
GPC4O75487 AC099063.3-201ENST00000642066 185 ntBASIC3.78□□□□□ -1.8
GPC4O75487 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GPC4O75487 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
GPC4O75487 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
GPC4O75487 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
GPC4O75487 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
GPC4O75487 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GPC4O75487 MTND4P16-201ENST00000466108 1367 ntBASIC3.77□□□□□ -1.81
GPC4O75487 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.77□□□□□ -1.81
GPC4O75487 AC090337.1-201ENST00000579651 2074 ntBASIC3.77□□□□□ -1.81
GPC4O75487 AC244517.1-201ENST00000606030 2086 ntBASIC3.77□□□□□ -1.81
GPC4O75487 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GPC4O75487 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
GPC4O75487 RNU6-335P-201ENST00000364563 113 ntBASIC3.77□□□□□ -1.81
GPC4O75487 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
GPC4O75487 Y_RNA.560-201ENST00000384689 102 ntBASIC3.77□□□□□ -1.81
GPC4O75487 RNY3P9-201ENST00000384727 106 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms