Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GTF2IP8-201ENST00000560687 584 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM3O75382 COX6CP3-201ENST00000580869 223 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 SNORD84-203ENST00000584275 78 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM3O75382 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM3O75382 DPRXP5-201ENST00000604662 539 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 AC004832.5-201ENST00000608677 401 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 AC069200.1-201ENST00000609511 323 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 AC010975.3-201ENST00000618727 978 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM3O75382 AC092650.2-201ENST00000619984 902 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 AC009318.4-201ENST00000620496 486 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 U4.6-201ENST00000621618 127 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 AC095031.1-201ENST00000623685 672 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 AC004777.1-201ENST00000624317 287 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM3O75382 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM3O75382 AC068647.1-201ENST00000489539 2265 ntBASIC3.21□□□□□ -1.9
TRIM3O75382 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM3O75382 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM3O75382 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM3O75382 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
TRIM3O75382 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM3O75382 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM3O75382 SNORA63.1-201ENST00000362493 131 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 RNU4-51P-201ENST00000364206 140 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 SUGT1P1-201ENST00000379514 476 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 SNORD116-12-201ENST00000384468 92 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AL161449.1-201ENST00000414531 1199 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM3O75382 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 GTF2IP7-202ENST00000436677 309 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 HSPE1P28-201ENST00000443139 211 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 AL357552.1-201ENST00000445254 415 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AC004022.1-201ENST00000447766 1066 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 RPL36AP33-201ENST00000450395 310 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AC093392.2-201ENST00000450682 337 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM3O75382 snoU109.3-201ENST00000459477 145 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 RPL21P8-201ENST00000465083 535 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AC104164.3-201ENST00000467363 1258 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM3O75382 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 MTATP6P9-201ENST00000515039 680 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 SNORA64.4-201ENST00000516632 81 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 SNORD59.2-201ENST00000516873 68 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM3O75382 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 LARP7P2-201ENST00000575306 125 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 MIR3912-201ENST00000577566 105 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM3O75382 BDH2P1-201ENST00000602288 736 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AC128687.1-201ENST00000605304 619 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AC092953.2-201ENST00000608000 699 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 AC012314.7-201ENST00000619693 93 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM3O75382 AC090897.3-201ENST00000636973 1157 ntBASIC3.2□□□□□ -1.9
TRIM3O75382 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM3O75382 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM3O75382 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM3O75382 AP002907.1-201ENST00000606361 1430 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TRIM3O75382 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM3O75382 FRG1CP-201ENST00000358464 769 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM3O75382 MIR490-201ENST00000384865 128 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 SNORA40.2-201ENST00000390847 128 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM3O75382 BX842559.1-201ENST00000419615 532 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 RPF2P1-201ENST00000424137 906 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM3O75382 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM3O75382 HMGB3P6-201ENST00000444896 598 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.19□□□□□ -1.9
TRIM3O75382 EXOSC3P1-201ENST00000448649 500 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 CYCSP35-201ENST00000451978 304 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 HMGN1P18-201ENST00000457642 277 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC084357.1-201ENST00000473404 255 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 SETP14-201ENST00000497538 873 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC119751.4-201ENST00000507498 357 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM3O75382 SNORA70.19-201ENST00000516717 90 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.19□□□□□ -1.9
TRIM3O75382 AC087808.1-201ENST00000520501 361 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC027309.2-201ENST00000520566 192 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.19□□□□□ -1.9
TRIM3O75382 AC022690.1-201ENST00000526681 550 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 DUXAP6-201ENST00000553858 601 ntBASIC3.19□□□□□ -1.9
TRIM3O75382 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms