Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 YWHAQP7-201ENST00000603536 658 ntBASIC3.77□□□□□ -1.81
LDB3O75112 AC020910.2-201ENST00000603635 610 ntBASIC3.77□□□□□ -1.81
LDB3O75112 AC007566.2-201ENST00000603642 413 ntBASIC3.77□□□□□ -1.81
LDB3O75112 OR5H6-203ENST00000642105 978 ntBASIC3.77□□□□□ -1.81
LDB3O75112 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB3O75112 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB3O75112 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 MTCO1P23-201ENST00000415223 1526 ntBASIC3.76□□□□□ -1.81
LDB3O75112 KPNA2P2-201ENST00000419546 1489 ntBASIC3.76□□□□□ -1.81
LDB3O75112 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 RNU5F-6P-201ENST00000362979 116 ntBASIC3.76□□□□□ -1.81
LDB3O75112 U3.15-201ENST00000365398 212 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RNA5SP283-201ENST00000365604 119 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RNU6-723P-201ENST00000383973 107 ntBASIC3.76□□□□□ -1.81
LDB3O75112 HMGB1P17-201ENST00000403495 628 ntBASIC3.76□□□□□ -1.81
LDB3O75112 LAP3P1-201ENST00000403648 294 ntBASIC3.76□□□□□ -1.81
LDB3O75112 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 BTF3P7-201ENST00000407097 488 ntBASIC3.76□□□□□ -1.81
LDB3O75112 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RNA5SP306-201ENST00000411087 107 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RNA5SP39-201ENST00000411245 120 ntBASIC3.76□□□□□ -1.81
LDB3O75112 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB3O75112 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 Z97055.1-201ENST00000419730 712 ntBASIC3.76□□□□□ -1.81
LDB3O75112 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LDB3O75112 AL117339.2-201ENST00000430475 180 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 EEF1E1P1-201ENST00000446998 430 ntBASIC3.76□□□□□ -1.81
LDB3O75112 FGF7P6-202ENST00000451282 293 ntBASIC3.76□□□□□ -1.81
LDB3O75112 FABP3P2-201ENST00000453169 399 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RPS15AP17-201ENST00000470598 390 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RPL23AP2-201ENST00000471227 466 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 AC002456.2-201ENST00000509356 380 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RNU6-1178P-201ENST00000516674 107 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB3O75112 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.76□□□□□ -1.81
LDB3O75112 AC087276.1-201ENST00000529659 480 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.76□□□□□ -1.81
LDB3O75112 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB3O75112 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB3O75112 AC022968.1-201ENST00000567372 442 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB3O75112 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.76□□□□□ -1.81
LDB3O75112 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 OR6R2P-201ENST00000609216 300 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB3O75112 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 AL158196.1-201ENST00000616786 434 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB3O75112 AL356596.1-201ENST00000624230 379 ntBASIC3.76□□□□□ -1.81
LDB3O75112 AC068724.3-201ENST00000625906 87 ntBASIC3.76□□□□□ -1.81
LDB3O75112 RNA5SP196-201ENST00000625967 102 ntBASIC3.76□□□□□ -1.81
LDB3O75112 U6.101-201ENST00000637707 76 ntBASIC3.76□□□□□ -1.81
LDB3O75112 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LDB3O75112 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LDB3O75112 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LDB3O75112 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB3O75112 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LDB3O75112 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.75□□□□□ -1.81
LDB3O75112 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LDB3O75112 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB3O75112 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
LDB3O75112 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB3O75112 RNA5SP399-201ENST00000364003 117 ntBASIC3.75□□□□□ -1.81
LDB3O75112 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LDB3O75112 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB3O75112 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB3O75112 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB3O75112 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB3O75112 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB3O75112 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB3O75112 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB3O75112 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB3O75112 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB3O75112 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.75□□□□□ -1.81
LDB3O75112 SNORD108-201ENST00000459332 71 ntBASIC3.75□□□□□ -1.81
LDB3O75112 MEMO1P3-201ENST00000459811 302 ntBASIC3.75□□□□□ -1.81
LDB3O75112 AL121769.1-201ENST00000469473 401 ntBASIC3.75□□□□□ -1.81
LDB3O75112 AC110792.1-201ENST00000491826 472 ntBASIC3.75□□□□□ -1.81
LDB3O75112 AC139783.2-201ENST00000504847 1145 ntBASIC3.75□□□□□ -1.81
LDB3O75112 HIGD1AP3-201ENST00000515857 278 ntBASIC3.75□□□□□ -1.81
LDB3O75112 RNU6-506P-201ENST00000516553 94 ntBASIC3.75□□□□□ -1.81
LDB3O75112 MIR2116-201ENST00000517221 80 ntBASIC3.75□□□□□ -1.81
LDB3O75112 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms