Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC104564.1-201ENST00000493028 407 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 RPS27AP18-201ENST00000515536 459 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 RNU6-1220P-201ENST00000517126 108 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 RPL7P20-201ENST00000520308 745 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 AC022616.3-201ENST00000523940 148 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.84□□□□□ -1.63
TRIM13O60858 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM13O60858 AC018552.1-201ENST00000562099 811 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM13O60858 AL390726.5-202ENST00000564800 256 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM13O60858 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM13O60858 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TRIM13O60858 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM13O60858 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM13O60858 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM13O60858 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
TRIM13O60858 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.84□□□□□ -1.64
TRIM13O60858 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
TRIM13O60858 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.84□□□□□ -1.64
TRIM13O60858 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TRIM13O60858 AP004289.2-201ENST00000444413 1457 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM13O60858 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM13O60858 SNORA17.1-201ENST00000362945 126 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 MIR1-2-201ENST00000384961 85 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM13O60858 AL031985.1-201ENST00000392713 418 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM13O60858 U3.35-201ENST00000408405 208 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 MIR548F5-201ENST00000408421 86 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 RNU6-193P-201ENST00000410977 107 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 RNU2-64P-201ENST00000411315 191 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 MCFD2P1-201ENST00000417812 300 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 RPL24P2-201ENST00000421023 475 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AL669831.1-202ENST00000428504 417 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AL160004.2-201ENST00000432935 350 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 AC004938.1-201ENST00000438468 308 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM13O60858 TXNP1-201ENST00000441872 371 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 FHP1-201ENST00000442741 703 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AC073415.1-201ENST00000449240 153 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM13O60858 MRPS31P2-201ENST00000451581 518 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM13O60858 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM13O60858 PGAM1P13-201ENST00000507497 754 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 MTCYBP40-201ENST00000509390 1135 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AC021146.1-201ENST00000511202 716 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 RNU4-29P-201ENST00000515943 174 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 RNU6-976P-201ENST00000516086 111 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 snoU109.6-201ENST00000516831 118 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 NARSP2-201ENST00000518524 679 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TRIM13O60858 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM13O60858 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM13O60858 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM13O60858 AL049779.2-201ENST00000553847 315 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM13O60858 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 SULT1C2P2-201ENST00000562517 294 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM13O60858 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM13O60858 AC008521.2-201ENST00000591021 259 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AC008687.2-201ENST00000597865 520 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AC105254.2-201ENST00000603636 436 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 AC013244.1-201ENST00000604279 193 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 PRR13P7-201ENST00000605538 430 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM13O60858 AL157817.1-201ENST00000614264 790 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 FAM157A-202ENST00000615155 405 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 MIR6837-201ENST00000620884 64 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 MIR1910-201ENST00000636955 80 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM13O60858 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM13O60858 ZNF807-201ENST00000328088 1707 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM13O60858 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
TRIM13O60858 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM13O60858 AL049780.3-201ENST00000624612 1583 ntBASIC4.82□□□□□ -1.64
TRIM13O60858 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms