Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GRIN3BO60391 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
GRIN3BO60391 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GRIN3BO60391 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
GRIN3BO60391 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GRIN3BO60391 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GRIN3BO60391 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.64□□□□□ -1.51
GRIN3BO60391 AL445437.1-201ENST00000623157 3087 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GRIN3BO60391 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GRIN3BO60391 AP005435.3-201ENST00000531260 3198 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.63□□□□□ -1.51
GRIN3BO60391 RNU6-28P-201ENST00000362378 107 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 Y_RNA.157-201ENST00000363638 102 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 SNORA20.2-201ENST00000383922 131 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 RNU6-456P-201ENST00000384493 107 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 RPL12P9-201ENST00000412942 488 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC019097.1-201ENST00000424783 735 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 AC008850.1-201ENST00000427546 362 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.63□□□□□ -1.51
GRIN3BO60391 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.63□□□□□ -1.51
GRIN3BO60391 USP9YP15-201ENST00000442391 422 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.63□□□□□ -1.51
GRIN3BO60391 RPL23AP41-201ENST00000484754 458 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.63□□□□□ -1.51
GRIN3BO60391 RNU6-709P-201ENST00000517257 104 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 PHBP17-201ENST00000528576 541 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.63□□□□□ -1.51
GRIN3BO60391 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC019176.2-201ENST00000611579 315 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC112487.2-201ENST00000637950 304 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC063976.2-201ENST00000425667 3556 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.63□□□□□ -1.51
GRIN3BO60391 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
GRIN3BO60391 MAPK10-304ENST00000641341 3984 ntBASIC5.63□□□□□ -1.51
GRIN3BO60391 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.63□□□□□ -1.51
GRIN3BO60391 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GRIN3BO60391 AC112198.2-201ENST00000426589 6996 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
GRIN3BO60391 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.62□□□□□ -1.51
GRIN3BO60391 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
GRIN3BO60391 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.62□□□□□ -1.51
GRIN3BO60391 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
GRIN3BO60391 RNU6-1097P-201ENST00000363586 107 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 Y_RNA.356-201ENST00000365475 113 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 RNU6-767P-201ENST00000384132 107 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 Y_RNA.529-201ENST00000384586 119 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 AL356421.1-201ENST00000403255 413 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 NDUFB4P4-201ENST00000404822 243 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.62□□□□□ -1.51
GRIN3BO60391 OR9R1P-201ENST00000412200 877 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC007390.1-201ENST00000415722 356 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC073136.2-201ENST00000417282 849 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.62□□□□□ -1.51
GRIN3BO60391 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.62□□□□□ -1.51
GRIN3BO60391 AC104073.1-201ENST00000451988 151 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 RN7SL517P-201ENST00000462240 305 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC053481.1-201ENST00000467217 306 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.62□□□□□ -1.51
GRIN3BO60391 AC117522.3-201ENST00000507974 584 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 RPS27AP18-201ENST00000515536 459 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.62□□□□□ -1.51
GRIN3BO60391 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.62□□□□□ -1.51
GRIN3BO60391 AL356432.3-201ENST00000568952 465 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 RPS3AP23-202ENST00000574601 686 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.62□□□□□ -1.51
GRIN3BO60391 RN7SL703P-201ENST00000578485 302 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 MIR3124-201ENST00000582636 67 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC011712.1-201ENST00000588959 234 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.62□□□□□ -1.51
GRIN3BO60391 AC022432.1-201ENST00000595739 310 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC113403.1-201ENST00000604910 193 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 Z98200.1-201ENST00000607298 470 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.62□□□□□ -1.51
GRIN3BO60391 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
GRIN3BO60391 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.62□□□□□ -1.51
GRIN3BO60391 MTND5P33-201ENST00000571250 1450 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.62□□□□□ -1.51
GRIN3BO60391 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 AC006026.1-201ENST00000444025 1803 ntBASIC5.62□□□□□ -1.51
GRIN3BO60391 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
GRIN3BO60391 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GRIN3BO60391 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
GRIN3BO60391 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
GRIN3BO60391 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
GRIN3BO60391 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms