Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.33□□□□□ -1.72
PHGDHO43175 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 RNU5E-1-201ENST00000362477 120 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 RHOT1P2-201ENST00000366423 333 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 SNORA70F-201ENST00000384142 135 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 SNORD66.1-201ENST00000391230 76 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC097374.1-203ENST00000400783 485 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.33□□□□□ -1.72
PHGDHO43175 FCF1P9-201ENST00000412546 282 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.33□□□□□ -1.72
PHGDHO43175 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.33□□□□□ -1.72
PHGDHO43175 UBE2V1P10-201ENST00000414685 269 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.33□□□□□ -1.72
PHGDHO43175 RPS7P15-201ENST00000415804 584 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 RPS23P10-201ENST00000416185 486 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 RPS15AP12-201ENST00000419498 388 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AL139095.3-201ENST00000419672 1203 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 UQCRBP1-201ENST00000421129 336 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.33□□□□□ -1.72
PHGDHO43175 RWDD4P2-201ENST00000426392 563 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 RPL31P35-201ENST00000431058 377 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.33□□□□□ -1.72
PHGDHO43175 AC104850.1-201ENST00000435940 476 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.33□□□□□ -1.72
PHGDHO43175 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PHGDHO43175 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.33□□□□□ -1.72
PHGDHO43175 RPL35AP15-201ENST00000468042 339 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC020893.1-201ENST00000502452 580 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC091133.4-201ENST00000511142 308 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC022483.1-201ENST00000514020 567 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.33□□□□□ -1.72
PHGDHO43175 PHBP17-201ENST00000528576 541 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.33□□□□□ -1.72
PHGDHO43175 AL133271.1-201ENST00000538229 291 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC087883.1-201ENST00000551882 391 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AL352979.3-201ENST00000553515 247 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 OR4T1P-201ENST00000554933 911 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.33□□□□□ -1.72
PHGDHO43175 AC006960.3-201ENST00000561845 705 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.33□□□□□ -1.72
PHGDHO43175 MIR4270-201ENST00000581799 70 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC069061.3-201ENST00000582254 823 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC004908.2-201ENST00000609090 574 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 OR6R2P-201ENST00000609216 300 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AL031666.3-201ENST00000609320 1006 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PHGDHO43175 AC136475.10-201ENST00000620253 385 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AL161637.1-201ENST00000622380 412 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 AC019278.1-201ENST00000623516 479 ntBASIC4.33□□□□□ -1.72
PHGDHO43175 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PHGDHO43175 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.33□□□□□ -1.72
PHGDHO43175 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PHGDHO43175 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PHGDHO43175 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.32□□□□□ -1.72
PHGDHO43175 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
PHGDHO43175 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.32□□□□□ -1.72
PHGDHO43175 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.32□□□□□ -1.72
PHGDHO43175 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.32□□□□□ -1.72
PHGDHO43175 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PHGDHO43175 RNU6-1155P-201ENST00000363554 107 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 RNU5A-8P-201ENST00000364102 114 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.32□□□□□ -1.72
PHGDHO43175 RNU6-516P-201ENST00000411381 104 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 MTND1P21-201ENST00000412991 285 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 PIGFP2-201ENST00000421400 651 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC244098.2-201ENST00000422068 99 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 TIMM9P1-201ENST00000436122 256 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 AL162388.1-201ENST00000450912 352 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC007967.1-201ENST00000455422 1159 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 RPL21P126-201ENST00000470049 478 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.32□□□□□ -1.72
PHGDHO43175 RPS23P1-201ENST00000491662 432 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 RPL9P6-201ENST00000492764 598 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.32□□□□□ -1.72
PHGDHO43175 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.32□□□□□ -1.72
PHGDHO43175 RNU6-506P-201ENST00000516553 94 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 Vault.3-201ENST00000516676 95 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.32□□□□□ -1.72
PHGDHO43175 IGKV1-32-201ENST00000519290 311 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.32□□□□□ -1.72
PHGDHO43175 DYNLL1P4-201ENST00000549314 266 ntBASIC4.32□□□□□ -1.72
PHGDHO43175 CYP4A43P-201ENST00000568156 121 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms