Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.03□□□□□ -1.92
LSM1O15116 ZNF415P1-201ENST00000582279 1166 ntBASIC3.03□□□□□ -1.92
LSM1O15116 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 AC106791.2-201ENST00000604680 391 ntBASIC3.03□□□□□ -1.92
LSM1O15116 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 MIR6798-201ENST00000612887 67 ntBASIC3.03□□□□□ -1.92
LSM1O15116 AC022509.4-201ENST00000621404 572 ntBASIC3.03□□□□□ -1.92
LSM1O15116 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 ZNF663P-202ENST00000641770 1131 ntBASIC3.03□□□□□ -1.92
LSM1O15116 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM1O15116 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LSM1O15116 AC006378.2-201ENST00000623178 2476 ntBASIC3.03□□□□□ -1.92
LSM1O15116 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LSM1O15116 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.03□□□□□ -1.92
LSM1O15116 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
LSM1O15116 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM1O15116 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM1O15116 RNU6-549P-201ENST00000384433 107 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AL024474.1-201ENST00000404655 591 ntBASIC3.02□□□□□ -1.93
LSM1O15116 RPS15AP38-201ENST00000413110 372 ntBASIC3.02□□□□□ -1.93
LSM1O15116 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM1O15116 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM1O15116 AL050321.1-201ENST00000432363 400 ntBASIC3.02□□□□□ -1.93
LSM1O15116 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM1O15116 AC234064.1-201ENST00000436312 247 ntBASIC3.02□□□□□ -1.93
LSM1O15116 MTCYBP34-201ENST00000439552 670 ntBASIC3.02□□□□□ -1.93
LSM1O15116 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
LSM1O15116 RPL21P133-201ENST00000443666 476 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM1O15116 AC008379.1-201ENST00000463655 464 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AC015908.1-201ENST00000478739 476 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM1O15116 AC111000.2-201ENST00000507775 550 ntBASIC3.02□□□□□ -1.93
LSM1O15116 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM1O15116 SNORA31.1-201ENST00000515993 133 ntBASIC3.02□□□□□ -1.93
LSM1O15116 SNORA31.5-201ENST00000516190 133 ntBASIC3.02□□□□□ -1.93
LSM1O15116 RNA5SP76-201ENST00000516277 87 ntBASIC3.02□□□□□ -1.93
LSM1O15116 RNU6-885P-201ENST00000516607 104 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AC023632.4-201ENST00000517783 191 ntBASIC3.02□□□□□ -1.93
LSM1O15116 OR8K2P-201ENST00000524645 927 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.02□□□□□ -1.93
LSM1O15116 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM1O15116 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM1O15116 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM1O15116 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM1O15116 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM1O15116 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.02□□□□□ -1.93
LSM1O15116 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.02□□□□□ -1.93
LSM1O15116 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM1O15116 AC002487.1-201ENST00000604565 994 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AC100793.4-201ENST00000613683 429 ntBASIC3.02□□□□□ -1.93
LSM1O15116 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM1O15116 AL118556.2-201ENST00000614375 824 ntBASIC3.02□□□□□ -1.93
LSM1O15116 AC008083.4-201ENST00000615076 444 ntBASIC3.02□□□□□ -1.93
LSM1O15116 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LSM1O15116 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.02□□□□□ -1.93
LSM1O15116 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
LSM1O15116 AC233263.6-201ENST00000631132 1963 ntBASIC3.01□□□□□ -1.93
LSM1O15116 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 Y_RNA.126-201ENST00000363382 111 ntBASIC3.01□□□□□ -1.93
LSM1O15116 SNORA14A-201ENST00000364773 135 ntBASIC3.01□□□□□ -1.93
LSM1O15116 SNORA62.3-201ENST00000365110 153 ntBASIC3.01□□□□□ -1.93
LSM1O15116 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM1O15116 RNU6-1074P-201ENST00000383995 104 ntBASIC3.01□□□□□ -1.93
LSM1O15116 GSTA8P-201ENST00000404253 637 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AL096701.2-201ENST00000416920 238 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM1O15116 MTCO1P39-201ENST00000426148 480 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM1O15116 AC092017.2-201ENST00000427600 362 ntBASIC3.01□□□□□ -1.93
LSM1O15116 PDSS1P2-201ENST00000449397 678 ntBASIC3.01□□□□□ -1.93
LSM1O15116 BTF3P5-201ENST00000457252 467 ntBASIC3.01□□□□□ -1.93
LSM1O15116 RPL32P14-201ENST00000463196 378 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AIG1P1-201ENST00000503376 148 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC084024.2-201ENST00000503480 791 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC093767.1-201ENST00000504523 156 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC006499.5-201ENST00000505037 514 ntBASIC3.01□□□□□ -1.93
LSM1O15116 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM1O15116 RNU6-27P-201ENST00000516146 107 ntBASIC3.01□□□□□ -1.93
LSM1O15116 RNU6-826P-201ENST00000516827 104 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.01□□□□□ -1.93
LSM1O15116 HMGB1P1-201ENST00000522557 636 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LSM1O15116 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 SNRPGP1-201ENST00000553864 222 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.01□□□□□ -1.93
LSM1O15116 AC090695.1-201ENST00000561269 1222 ntBASIC3.01□□□□□ -1.93
LSM1O15116 MIR4789-201ENST00000577469 82 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC053481.3-201ENST00000577881 843 ntBASIC3.01□□□□□ -1.93
LSM1O15116 CCDC58P3-201ENST00000590792 430 ntBASIC3.01□□□□□ -1.93
LSM1O15116 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 CKS1BP3-201ENST00000600888 237 ntBASIC3.01□□□□□ -1.93
LSM1O15116 GAS5-AS1-201ENST00000602767 694 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.01□□□□□ -1.93
LSM1O15116 AP001330.4-201ENST00000604350 154 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC055876.5-201ENST00000605667 259 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AC009570.1-201ENST00000609599 745 ntBASIC3.01□□□□□ -1.93
LSM1O15116 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms