Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC112191.3-201ENST00000604371 277 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AL021997.1-201ENST00000605757 193 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 AC006338.2-201ENST00000616864 791 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AL359715.5-201ENST00000623431 443 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
FOXN3O00409 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
FOXN3O00409 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXN3O00409 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXN3O00409 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
FOXN3O00409 EXOC5P1-201ENST00000510543 1969 ntBASIC4.44□□□□□ -1.7
FOXN3O00409 AC027514.1-201ENST00000588561 1603 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
FOXN3O00409 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 MAPK10-253ENST00000641010 4072 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
FOXN3O00409 RPS20P2-201ENST00000402520 389 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AL583834.1-201ENST00000406943 343 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 Y_RNA.598-201ENST00000410480 95 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 HMGN1P14-201ENST00000412459 517 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 USP9YP13-201ENST00000417797 480 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 COX6B1P7-201ENST00000430845 235 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
FOXN3O00409 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXN3O00409 RNA5SP246-201ENST00000458909 119 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 snoU109.4-201ENST00000458953 143 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 RPL23AP2-201ENST00000471227 466 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 AC017037.2-201ENST00000513850 890 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.43□□□□□ -1.7
FOXN3O00409 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.43□□□□□ -1.7
FOXN3O00409 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 CR383656.7-201ENST00000548164 174 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXN3O00409 AC137800.2-201ENST00000574375 120 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AC060771.1-201ENST00000582031 164 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
FOXN3O00409 MIR3138-201ENST00000585238 82 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
FOXN3O00409 OR10AB1P-201ENST00000609613 938 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AC023043.4-201ENST00000612081 449 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 AC104010.1-201ENST00000616889 150 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AP005264.7-201ENST00000625003 745 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXN3O00409 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
FOXN3O00409 TEX21P-201ENST00000447107 1476 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 AC026951.1-201ENST00000559530 2459 ntBASIC4.43□□□□□ -1.7
FOXN3O00409 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FOXN3O00409 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXN3O00409 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXN3O00409 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 SNORD74.4-201ENST00000364129 80 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 RNU6-114P-201ENST00000384704 105 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 DEFB108C-201ENST00000400154 252 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 RNU4-25P-201ENST00000410569 230 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 RPL23AP26-201ENST00000412728 464 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN3O00409 BTF3P10-201ENST00000433415 495 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN3O00409 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.42□□□□□ -1.7
FOXN3O00409 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXN3O00409 AC106872.2-201ENST00000494303 480 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC108475.1-201ENST00000507880 950 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC079140.3-201ENST00000511111 550 ntBASIC4.42□□□□□ -1.7
FOXN3O00409 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms