Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 AC009643.2-201ENST00000603543 1448 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 BTBD10P1-201ENST00000549824 1352 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RCCD1A6NED2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RCCD1A6NED2 RNU6-682P-201ENST00000363843 106 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 RNY1P5-201ENST00000383890 115 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 ENSAP1-201ENST00000392855 326 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 COX6CP10-201ENST00000416832 224 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 AL354868.1-201ENST00000417077 482 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.36□□□□□ -1.39
RCCD1A6NED2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.36□□□□□ -1.39
RCCD1A6NED2 KF459542.1-201ENST00000450908 553 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 CYCSP25-201ENST00000525280 316 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.36□□□□□ -1.39
RCCD1A6NED2 RN7SL652P-201ENST00000577769 300 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.36□□□□□ -1.39
RCCD1A6NED2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.36□□□□□ -1.39
RCCD1A6NED2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.36□□□□□ -1.39
RCCD1A6NED2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RCCD1A6NED2 AC109446.4-201ENST00000623235 2755 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 AL606537.1-201ENST00000607258 2011 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RCCD1A6NED2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 Y_RNA.16-201ENST00000362421 102 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 U3.13-201ENST00000364804 214 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 RNA5SP485-201ENST00000365053 119 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 RNA5SP211-201ENST00000365516 117 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 U3.35-201ENST00000408405 208 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 RNU6-607P-201ENST00000411283 108 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 AL360271.2-201ENST00000447710 161 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 RN7SL393P-201ENST00000463588 296 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC009120.1-201ENST00000493458 473 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC090958.1-201ENST00000511122 351 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC005951.2-201ENST00000576282 495 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 MIR5696-201ENST00000578474 85 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RCCD1A6NED2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RCCD1A6NED2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 AL034546.1-201ENST00000623740 3693 ntBASIC6.35□□□□□ -1.39
RCCD1A6NED2 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RCCD1A6NED2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RCCD1A6NED2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RCCD1A6NED2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RCCD1A6NED2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 Y_RNA.170-201ENST00000363746 110 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 RN7SKP250-201ENST00000363924 321 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 RNU6-740P-201ENST00000364734 105 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 CYB5AP4-201ENST00000396692 399 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RCCD1A6NED2 MTND3P9-201ENST00000429526 346 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 AC091286.1-201ENST00000431233 461 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 RPL12P49-201ENST00000441100 121 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 RNU6-1037P-201ENST00000459571 107 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 HMGB1P25-201ENST00000468402 607 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 SNORA70.11-201ENST00000515987 138 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 SNORA70.13-201ENST00000516116 138 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 SCARNA24.2-201ENST00000516968 130 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 RN7SKP258-201ENST00000517151 304 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 AF186190.1-201ENST00000517470 480 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 MRPS36P4-201ENST00000534436 298 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 AC004024.1-201ENST00000549244 247 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 AC136932.1-201ENST00000574771 208 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 MIR4643-201ENST00000577473 78 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.34□□□□□ -1.39
RCCD1A6NED2 MIR548AC-201ENST00000585049 88 ntBASIC6.34□□□□□ -1.39
RCCD1A6NED2 AC123786.2-201ENST00000603459 275 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms