Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AC106785.1-201ENST00000565935 262 ntBASIC3.55□□□□□ -1.84
SYCE3A1L190 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.55□□□□□ -1.84
SYCE3A1L190 MIR3912-201ENST00000577566 105 ntBASIC3.55□□□□□ -1.84
SYCE3A1L190 MIR4276-201ENST00000584832 70 ntBASIC3.55□□□□□ -1.84
SYCE3A1L190 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.55□□□□□ -1.84
SYCE3A1L190 BNIP3P24-201ENST00000593398 557 ntBASIC3.55□□□□□ -1.84
SYCE3A1L190 BNIP3P31-201ENST00000604515 566 ntBASIC3.55□□□□□ -1.84
SYCE3A1L190 U6.101-201ENST00000637707 76 ntBASIC3.55□□□□□ -1.84
SYCE3A1L190 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.55□□□□□ -1.84
SYCE3A1L190 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.55□□□□□ -1.84
SYCE3A1L190 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.55□□□□□ -1.84
SYCE3A1L190 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SYCE3A1L190 SGO1P2-201ENST00000429458 1589 ntBASIC3.55□□□□□ -1.84
SYCE3A1L190 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 RNU6-878P-201ENST00000384578 110 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 Y_RNA.578-201ENST00000390903 88 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC110754.1-201ENST00000399740 601 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC025750.1-201ENST00000399891 379 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 RNU2-15P-201ENST00000410692 191 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 PSMA6P3-201ENST00000428242 164 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.54□□□□□ -1.84
SYCE3A1L190 MTCYBP11-201ENST00000447254 1109 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AL672167.3-201ENST00000465951 960 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC012181.1-201ENST00000479895 423 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC108860.1-201ENST00000484521 383 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 KLHL2P1-201ENST00000508691 521 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 MTCYBP16-201ENST00000509187 1129 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC026412.2-201ENST00000512270 1075 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AC087808.1-201ENST00000520501 361 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SYCE3A1L190 SNRPGP16-201ENST00000533275 226 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.54□□□□□ -1.84
SYCE3A1L190 GTF2IP8-201ENST00000560687 584 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AC083760.1-201ENST00000589621 670 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 AL606834.3-201ENST00000602615 496 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AL109653.1-201ENST00000603091 248 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC069545.1-201ENST00000605671 358 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC009237.15-201ENST00000610252 501 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC005332.6-201ENST00000613178 446 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 AC104985.3-201ENST00000623479 597 ntBASIC3.54□□□□□ -1.84
SYCE3A1L190 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.54□□□□□ -1.84
SYCE3A1L190 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SYCE3A1L190 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYCE3A1L190 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYCE3A1L190 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.53□□□□□ -1.84
SYCE3A1L190 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SYCE3A1L190 Y_RNA.25-201ENST00000362528 102 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 RNU6-216P-201ENST00000363282 104 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 RNU6-1000P-201ENST00000391066 106 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SYCE3A1L190 AL591034.1-201ENST00000407447 340 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AL450338.1-201ENST00000407987 512 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.53□□□□□ -1.84
SYCE3A1L190 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.53□□□□□ -1.84
SYCE3A1L190 RPF2P1-201ENST00000424137 906 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AC093151.1-201ENST00000427711 313 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AC108734.1-201ENST00000439549 399 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.53□□□□□ -1.84
SYCE3A1L190 RPL7P15-201ENST00000461190 712 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AL049829.1-201ENST00000465411 156 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AC010625.1-201ENST00000511296 403 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.53□□□□□ -1.84
SYCE3A1L190 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AC104986.1-201ENST00000517978 436 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYCE3A1L190 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.53□□□□□ -1.84
SYCE3A1L190 RPL21P12-201ENST00000559810 515 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 MIR4474-201ENST00000579189 78 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.53□□□□□ -1.84
SYCE3A1L190 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.53□□□□□ -1.84
SYCE3A1L190 AC073348.1-201ENST00000623002 331 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AL356863.1-201ENST00000623378 1080 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 AC095031.1-201ENST00000623685 672 ntBASIC3.53□□□□□ -1.84
SYCE3A1L190 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.53□□□□□ -1.84
SYCE3A1L190 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.53□□□□□ -1.84
SYCE3A1L190 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
SYCE3A1L190 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYCE3A1L190 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYCE3A1L190 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYCE3A1L190 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYCE3A1L190 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms