Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AL353997.4-201ENST00000586196 166 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC006077.1-201ENST00000604746 343 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC090186.1-201ENST00000605991 572 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU1-30P-201ENST00000606575 163 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC008121.2-201ENST00000614647 523 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL356596.1-201ENST00000624230 379 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MIR6830-201ENST00000636015 70 ntBASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV4-1A0A0J9YWV2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SPRR2C-201ENST00000290702 219 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RN7SKP285-201ENST00000410137 318 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RN7SKP266-201ENST00000410232 287 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RPS15AP38-201ENST00000413110 372 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL513174.1-201ENST00000423182 629 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL591419.1-201ENST00000427423 339 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC016712.1-201ENST00000431088 378 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR4C10P-201ENST00000434991 931 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SDCBPP1-201ENST00000440192 890 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MTATP6P26-201ENST00000445926 662 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 Z95327.1-201ENST00000446082 482 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC010655.1-201ENST00000449336 292 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL353691.1-201ENST00000451332 387 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC072039.1-201ENST00000477611 581 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 BET1P1-201ENST00000482276 359 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 FAM172BP-201ENST00000487497 1089 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 COX7A2P2-201ENST00000505291 250 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RN7SKP60-201ENST00000516985 239 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR4P1P-201ENST00000530808 1136 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SETP7-201ENST00000552169 453 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TGIF1P1-201ENST00000558095 802 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL109653.1-201ENST00000603091 248 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC010738.1-201ENST00000604970 987 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC022149.2-201ENST00000621061 203 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL357559.1-201ENST00000622228 274 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC009039.2-201ENST00000624524 529 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR8B1P-202ENST00000641132 1178 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC244517.1-201ENST00000606030 2086 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 PRO1804-201ENST00000623780 2050 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 USP8P1-201ENST00000494673 3183 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AP001486.2-201ENST00000561652 5113 ntBASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL049780.3-201ENST00000624612 1583 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MIR30E-201ENST00000362104 92 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-28P-201ENST00000362378 107 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 RNU6-289P-201ENST00000364093 107 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 SNORA62-201ENST00000365493 153 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AP002088.1-201ENST00000382740 395 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MIR30B-201ENST00000384850 88 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 U3.39-201ENST00000408569 239 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC245052.5-201ENST00000416320 649 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 MTCYBP39-201ENST00000437562 491 ntBASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV4-1A0A0J9YWV2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms