Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 GOT2P5-201ENST00000433995 546 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 RPL23AP33-201ENST00000442301 452 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC109486.1-201ENST00000486833 374 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC104685.1-201ENST00000502445 371 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC108078.3-201ENST00000502633 489 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 MTCYBP17-201ENST00000503579 789 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 HMGN1P11-201ENST00000508668 303 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC093281.2-201ENST00000510153 597 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 SNORA67.7-201ENST00000516664 135 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 RPL12P22-201ENST00000519073 490 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX9Q9Y5X1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 HIGD1AP10-201ENST00000527837 282 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AL512347.1-201ENST00000566420 503 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 MIR3158-1-201ENST00000583596 81 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AF131215.7-201ENST00000602443 707 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC245389.1-201ENST00000605141 529 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 RNU1-30P-201ENST00000606575 163 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC073114.1-201ENST00000612027 490 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC092192.1-201ENST00000633154 1018 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 AC012442.3-202ENST00000636742 206 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX9Q9Y5X1 MTCO1P24-201ENST00000515438 1558 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 TNPO1P3-201ENST00000436471 2662 ntBASIC4□□□□□ -1.77
SNX9Q9Y5X1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX9Q9Y5X1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX9Q9Y5X1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4□□□□□ -1.77
SNX9Q9Y5X1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC090337.1-201ENST00000579651 2074 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 MFSD8-236ENST00000641509 4050 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RNU4-21P-201ENST00000362802 126 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RNU6-433P-201ENST00000363216 104 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL359837.1-201ENST00000381357 287 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 MT-TH-201ENST00000387441 69 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 SNORA26.8-201ENST00000391306 124 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RPL21P17-201ENST00000397467 475 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 USP9YP33-201ENST00000412220 421 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL035423.1-201ENST00000420331 213 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 Z99497.1-201ENST00000421282 135 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 ATP5HP2-201ENST00000433885 485 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 USP9YP35-201ENST00000435696 412 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 MTCYBP39-201ENST00000437562 491 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL356535.1-201ENST00000440335 398 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC006480.1-201ENST00000449887 378 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 MTCO3P16-201ENST00000454456 754 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 MTCO3P11-201ENST00000455103 774 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RPS20P32-201ENST00000456044 356 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC007537.2-201ENST00000472093 511 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC013828.1-201ENST00000481845 158 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 TMEM248P1-201ENST00000510579 951 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RNU6-583P-201ENST00000516012 92 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RNU1-95P-201ENST00000516357 160 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 RNU1-128P-201ENST00000516704 160 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC106038.2-201ENST00000520706 568 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AL121766.1-201ENST00000547436 487 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC006960.3-201ENST00000561845 705 ntBASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX9Q9Y5X1 AC068790.2-201ENST00000602601 557 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms