Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 BX664608.1-201ENST00000610519 487 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC100793.4-201ENST00000613683 429 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AL603758.1-201ENST00000618654 241 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 MIR6830-201ENST00000636015 70 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC099654.13-201ENST00000639774 207 ntBASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.91□□□□□ -1.62
COL4A3BPQ9Y5P4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A3BPQ9Y5P4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.9□□□□□ -1.62
COL4A3BPQ9Y5P4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A3BPQ9Y5P4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL4A3BPQ9Y5P4 AC012020.1-201ENST00000624541 1728 ntBASIC4.9□□□□□ -1.62
COL4A3BPQ9Y5P4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR19A-201ENST00000384878 82 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-278P-201ENST00000390945 109 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL7AP73-201ENST00000413490 353 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 VDAC1P3-201ENST00000434069 851 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL23AP31-201ENST00000456160 467 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 OR9M1P-201ENST00000459641 921 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RN7SL303P-201ENST00000469773 251 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RN7SL812P-201ENST00000493791 279 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL23AP55-201ENST00000498163 452 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 BNIP3P41-201ENST00000503774 571 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 SNRPGP16-201ENST00000533275 226 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL23AP97-201ENST00000568955 471 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC023575.1-201ENST00000580510 358 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC103987.3-201ENST00000582071 292 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 CKS1BP3-201ENST00000600888 237 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC079587.1-201ENST00000603846 277 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AL034351.1-201ENST00000605288 668 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AL451086.1-201ENST00000605596 223 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC093838.1-201ENST00000613014 469 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC138932.5-201ENST00000617759 563 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC009509.4-201ENST00000619202 509 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC243312.2-201ENST00000623340 601 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 AC019226.1-201ENST00000625666 515 ntBASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
COL4A3BPQ9Y5P4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC010300.1-201ENST00000600671 5134 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 SNORA75-201ENST00000384158 137 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 RPS20P14-201ENST00000412545 360 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL139095.3-201ENST00000419672 1203 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC079780.1-201ENST00000428259 207 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 MTND6P13-201ENST00000443510 523 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 Y_RNA.672-201ENST00000516289 104 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 DEFB108D-201ENST00000527787 222 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC022882.1-201ENST00000532142 501 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 PARP1P2-201ENST00000556806 195 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR3146-201ENST00000580367 79 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 KC877982.1-201ENST00000602313 470 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL160290.3-201ENST00000604869 165 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL590392.1-201ENST00000604960 446 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL139286.2-201ENST00000606838 396 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 Z98200.1-201ENST00000607298 470 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC103710.1-201ENST00000610003 901 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms