Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC096638.2-201ENST00000434965 711 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 NPM1P49-201ENST00000448027 714 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 Z82190.1-201ENST00000454534 490 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC099563.1-201ENST00000456086 418 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 RPL21P104-201ENST00000464143 478 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 RPS29P19-201ENST00000479709 171 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC112204.1-201ENST00000502591 103 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC079140.3-201ENST00000511111 550 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC034268.2-201ENST00000571784 482 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC022655.2-201ENST00000577280 318 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 MIR4697-201ENST00000582977 78 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 BNIP3P8-201ENST00000597863 560 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC012531.5-201ENST00000611375 151 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC122108.2-201ENST00000611946 526 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 RMST_9.1-201ENST00000619945 193 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 AC092125.1-201ENST00000562568 1995 ntBASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLDN16Q9Y5I7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CLDN16Q9Y5I7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
CLDN16Q9Y5I7 CCT4P2-201ENST00000233836 1548 ntBASIC3.9□□□□□ -1.78
CLDN16Q9Y5I7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.9□□□□□ -1.78
CLDN16Q9Y5I7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLDN16Q9Y5I7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 RNY4P24-201ENST00000362735 96 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 RNA5SP317-201ENST00000410176 116 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 RNA5SP311-201ENST00000411290 116 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 RPS23P10-201ENST00000416185 486 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL356095.1-201ENST00000417217 199 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 USP9YP13-201ENST00000417797 480 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC244098.2-201ENST00000422068 99 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 RPL23AP38-201ENST00000423801 469 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC103987.1-201ENST00000473394 348 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AF213884.1-201ENST00000488102 463 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC068305.1-201ENST00000497406 726 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC002456.2-201ENST00000509356 380 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 SNORA70.14-201ENST00000516205 110 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 RNA5SP315-201ENST00000516340 116 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 RNA5SP312-201ENST00000517068 116 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC005771.1-201ENST00000585581 349 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL591034.3-201ENST00000605511 685 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 MIR432-201ENST00000606207 94 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC104073.3-201ENST00000610942 955 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC008250.2-201ENST00000615261 205 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL590099.1-201ENST00000615276 138 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC138932.5-201ENST00000617759 563 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC055839.1-201ENST00000634467 498 ntBASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN16Q9Y5I7 AC027287.1-201ENST00000553115 1453 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms