Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC008065.1-201ENST00000428525 348 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 NPM1P34-201ENST00000428821 893 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 SNRPEP7-201ENST00000438350 220 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 ELOCP7-201ENST00000439968 331 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 RABEPKP1-201ENST00000440529 1026 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC106872.3-201ENST00000495104 446 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC012170.1-201ENST00000495139 359 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC025884.1-201ENST00000556034 378 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC017100.2-201ENST00000584628 355 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 DUXAP4-201ENST00000603046 613 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 RNA5SP108-201ENST00000605921 117 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AL590282.1-201ENST00000610379 1136 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AL021997.2-201ENST00000615674 271 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC002553.4-201ENST00000616896 331 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 MIR6891-201ENST00000618788 93 ntBASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTDP1Q9Y5B0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 Y_RNA.126-201ENST00000363382 111 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 RNY4P14-201ENST00000363656 96 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 MIR320C1-201ENST00000408566 88 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP36-201ENST00000410197 133 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 PRELID3BP11-201ENST00000414230 479 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 RPL7P30-201ENST00000420888 709 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 RPL36AP10-201ENST00000421785 322 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 TIMM9P3-201ENST00000428659 274 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AL451074.3-201ENST00000437709 472 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 LSM1P1-201ENST00000438629 273 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 RPL23AP15-201ENST00000450202 459 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 FGF7P3-201ENST00000454645 303 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 SNORD108-201ENST00000459332 71 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC008958.1-201ENST00000511047 682 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP49-201ENST00000516450 115 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 OR5AQ1P-201ENST00000527596 927 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 TRAV8-5-201ENST00000537369 341 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AL391840.1-201ENST00000571144 367 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 MIR544B-201ENST00000582372 78 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 MIR4307-201ENST00000582802 84 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC022916.3-201ENST00000592961 742 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC104010.1-201ENST00000616889 150 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 MIR6864-201ENST00000617935 70 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AL359880.1-201ENST00000621879 266 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 AC068880.5-201ENST00000624331 290 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 LARP1BP1-201ENST00000506036 1359 ntBASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTDP1Q9Y5B0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC006378.2-201ENST00000623178 2476 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC092435.4-201ENST00000623012 4159 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP502-201ENST00000362694 119 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 Y_RNA.402-201ENST00000383972 102 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 MIR124-3-201ENST00000384866 87 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-876P-201ENST00000391295 104 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 MIR921-201ENST00000401133 56 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AL139095.3-201ENST00000419672 1203 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC069157.1-201ENST00000421749 137 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AL513174.1-201ENST00000423182 629 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC012498.1-201ENST00000424037 437 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 BX890604.2-201ENST00000427883 474 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms