Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.06□□□□□ -1.76
PKP3Q9Y446 AC091965.4-201ENST00000607691 587 ntBASIC4.06□□□□□ -1.76
PKP3Q9Y446 AC008121.2-201ENST00000614647 523 ntBASIC4.06□□□□□ -1.76
PKP3Q9Y446 AC083809.1-201ENST00000615051 472 ntBASIC4.06□□□□□ -1.76
PKP3Q9Y446 MIR492-201ENST00000638676 116 ntBASIC4.06□□□□□ -1.76
PKP3Q9Y446 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKP3Q9Y446 ZNF962P-201ENST00000443465 3140 ntBASIC4.06□□□□□ -1.76
PKP3Q9Y446 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PKP3Q9Y446 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP3Q9Y446 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP3Q9Y446 MTND4P5-201ENST00000435821 1374 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP3Q9Y446 RNY4P24-201ENST00000362735 96 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP3Q9Y446 RNU6-192P-201ENST00000391253 100 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 Y_RNA.598-201ENST00000410480 95 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 OR8F1P-201ENST00000425243 930 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 MTND1P34-201ENST00000438556 671 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 RPL29P29-201ENST00000448725 423 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 RPL7P52-201ENST00000449200 742 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AL590365.1-201ENST00000450788 243 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 OR9M1P-201ENST00000459641 921 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 RN7SL385P-201ENST00000468873 276 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 RPS26P15-201ENST00000488067 348 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC108064.1-201ENST00000513791 460 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC022880.1-201ENST00000534017 973 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC025884.1-201ENST00000556034 378 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC025165.5-201ENST00000602802 578 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AL355812.1-201ENST00000603215 216 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC012603.1-201ENST00000606424 528 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC015540.1-201ENST00000615828 501 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC138932.5-201ENST00000617759 563 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC099842.1-201ENST00000619919 596 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PKP3Q9Y446 MIR4727-201ENST00000622232 55 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC112484.5-201ENST00000624189 228 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP3Q9Y446 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AC092447.10-201ENST00000620607 1652 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AL049780.3-201ENST00000624612 1583 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 AP002001.2-201ENST00000529025 1469 ntBASIC4.05□□□□□ -1.76
PKP3Q9Y446 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.05□□□□□ -1.76
PKP3Q9Y446 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PKP3Q9Y446 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP3Q9Y446 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP3Q9Y446 LINC02471-203ENST00000641941 4752 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 RNU6-853P-201ENST00000364306 107 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 SNORA70.2-201ENST00000364506 135 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 U3.29-201ENST00000391296 212 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL356421.1-201ENST00000403255 413 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 RNA5SP306-201ENST00000411087 107 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 USP9YP14-201ENST00000430663 563 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 RPS6P12-201ENST00000432491 726 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 MTCYBP45-201ENST00000435243 565 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 ELOCP30-201ENST00000447108 299 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC114755.5-201ENST00000447760 831 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 MTCO1P42-201ENST00000457379 726 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 snoU13.8-201ENST00000458890 104 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 RN7SL860P-201ENST00000473738 223 ntBASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKP3Q9Y446 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PKP3Q9Y446 CDC42P4-201ENST00000510507 563 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms