Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 AC007224.1-201ENST00000564410 144 ntBASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 AC004908.2-201ENST00000609090 574 ntBASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 AC004656.1-201ENST00000568479 4951 ntBASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTCBQ9Y3I0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AP004289.2-201ENST00000444413 1457 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 RNA5SP453-201ENST00000362503 119 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 SNORA73.1-201ENST00000363107 205 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 Y_RNA.133-201ENST00000363428 110 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AL645608.4-201ENST00000423619 154 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AL138799.3-201ENST00000438968 350 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC114495.1-201ENST00000441274 436 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 Y_RNA.635-201ENST00000459041 101 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC055855.1-201ENST00000489563 579 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC005912.1-201ENST00000495392 255 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 HMGB3P15-201ENST00000507326 574 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 SNORA70.11-201ENST00000515987 138 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 SNORA70.13-201ENST00000516116 138 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AP001781.1-201ENST00000530977 207 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC022884.2-201ENST00000578535 580 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC105224.1-201ENST00000587055 421 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AP001029.3-201ENST00000588063 596 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC068790.3-201ENST00000602988 553 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC008782.1-201ENST00000603386 430 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 uc_338.15-201ENST00000615470 191 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC079597.1-201ENST00000624306 508 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC020633.1-201ENST00000468439 2247 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC097714.1-201ENST00000511272 1647 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 AC009951.1-201ENST00000623674 2614 ntBASIC6.1□□□□□ -1.43
RTCBQ9Y3I0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 RN7SKP44-201ENST00000363602 316 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 RNU4-20P-201ENST00000365601 151 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 Y_RNA.395-201ENST00000383945 109 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 RNA5SP241-201ENST00000391326 114 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AL359634.1-202ENST00000404721 284 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 RNU2-39P-201ENST00000410604 198 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC012065.2-201ENST00000421295 375 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 RPL34P6-201ENST00000432390 345 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC093156.1-201ENST00000440382 670 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 RPL21P99-201ENST00000480369 423 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 FAM206BP-201ENST00000510179 541 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC021146.1-201ENST00000511202 716 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC018797.3-201ENST00000513388 1241 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 Y_RNA.665-201ENST00000516177 98 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 NARSP2-201ENST00000518524 679 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC100784.1-201ENST00000522790 310 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 DNAJC8P1-201ENST00000554535 372 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 RN7SL652P-201ENST00000577769 300 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC053481.3-201ENST00000577881 843 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 AC100830.2-201ENST00000581636 240 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 GLUD1P4-201ENST00000590914 418 ntBASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RTCBQ9Y3I0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.09□□□□□ -1.44
RTCBQ9Y3I0 AL731566.1-201ENST00000620490 1937 ntBASIC6.09□□□□□ -1.44
RTCBQ9Y3I0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RTCBQ9Y3I0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RAD17P1-201ENST00000418130 2042 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms