Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RPL7P28-201ENST00000437739 740 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 LSM1P1-201ENST00000438629 273 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 USP9YP12-201ENST00000450481 570 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 HMGB3P21-201ENST00000452483 547 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 FTH1P24-201ENST00000503502 462 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 SAP18P1-201ENST00000512058 390 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC108064.1-201ENST00000513791 460 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC104986.1-201ENST00000517978 436 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 OR5M7P-201ENST00000526140 972 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC124068.1-201ENST00000563131 678 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 MIR4512-201ENST00000583257 77 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 BNIP3P8-201ENST00000597863 560 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC010680.3-201ENST00000604215 520 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC245389.1-201ENST00000605141 529 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 Z98200.1-201ENST00000607298 470 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 AC080013.4-201ENST00000607624 649 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 SEPT14P19-203ENST00000633205 211 ntBASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX2IPQ9Y2D8 MTND5P28-201ENST00000438005 1594 ntBASIC4.53□□□□□ -1.69
SSX2IPQ9Y2D8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC006378.2-201ENST00000623178 2476 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 RNA5SP391-201ENST00000363456 119 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 RNA5SP22-201ENST00000365393 109 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 SNORA51.6-201ENST00000384151 125 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 ZNF603P-201ENST00000405613 487 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 RNA5SP39-201ENST00000411245 120 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL356583.2-201ENST00000426536 280 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 RPL23AP74-201ENST00000437246 471 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 SKP1P1-201ENST00000438081 489 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL031667.1-201ENST00000440222 725 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 MTND1P1-201ENST00000445453 368 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 RNA5SP246-201ENST00000458909 119 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 KLF3P2-201ENST00000465138 268 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC087879.1-201ENST00000474343 374 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC023424.2-201ENST00000493479 777 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC005726.1-201ENST00000494679 427 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AP002812.1-201ENST00000495378 474 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 TMEM251P1-201ENST00000503717 318 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 MTND4LP18-201ENST00000526864 291 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 MTCYBP41-201ENST00000528913 1123 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AGGF1P8-201ENST00000562979 1000 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL133457.1-201ENST00000564251 987 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 RPL23AP97-201ENST00000568955 471 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 MIR5697-201ENST00000578045 78 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AP001180.3-201ENST00000582221 145 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 MIR544B-201ENST00000582372 78 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 MIR4307-201ENST00000582802 84 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC053481.4-201ENST00000583164 216 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 MAGOH2P-202ENST00000584384 429 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC006130.2-201ENST00000586202 326 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 VN1R79P-201ENST00000593540 513 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL159169.3-201ENST00000608871 561 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms