Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AP002001.2-201ENST00000529025 1469 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 MIR3074-201ENST00000384885 81 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 MIR659-201ENST00000384963 97 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RPL17P50-201ENST00000396131 546 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RPL23AP26-201ENST00000412728 464 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RAD23BP2-201ENST00000416003 1207 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 USP9YP13-201ENST00000417797 480 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RPEP2-201ENST00000432149 701 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RPS6P12-201ENST00000432491 726 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RPL7P28-201ENST00000437739 740 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC244505.5-201ENST00000443639 207 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 HSFY6P-201ENST00000445573 403 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 NDUFS5P3-201ENST00000450668 321 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AL590365.1-201ENST00000450788 243 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 BX276092.4-201ENST00000452056 248 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 MTCO1P42-201ENST00000457379 726 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 snoU13.22-201ENST00000459428 104 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AP001992.1-205ENST00000462248 379 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 OR5H5P-201ENST00000503164 928 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC093853.1-201ENST00000515689 483 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AP002453.2-201ENST00000533503 320 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 RPL23AP97-201ENST00000568955 471 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 MIR4458-201ENST00000578872 75 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC022916.3-201ENST00000592961 742 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 BNIP3P8-201ENST00000597863 560 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC007566.2-201ENST00000603642 413 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC090578.1-201ENST00000604955 591 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC008498.1-201ENST00000613012 531 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AP001506.1-201ENST00000615444 211 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AL596245.1-201ENST00000618994 362 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 NUP58P1-201ENST00000502546 1738 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 AC105074.1-201ENST00000623380 3095 ntBASIC4.2□□□□□ -1.74
VPS4AQ9UN37 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.2□□□□□ -1.74
VPS4AQ9UN37 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL133412.1-201ENST00000380194 2992 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 SNORD74.4-201ENST00000364129 80 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RNU6-744P-201ENST00000365557 107 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RNU6-259P-201ENST00000383999 107 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RNU6-533P-201ENST00000384144 107 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RNU6-1042P-201ENST00000384204 107 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RNU6-1316P-201ENST00000384242 108 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RNU6-878P-201ENST00000384578 110 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RNA5SP171-201ENST00000391071 115 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RPS20P14-201ENST00000412545 360 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 GLRXP1-201ENST00000423261 334 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL035410.1-201ENST00000427409 427 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC104651.1-201ENST00000427559 735 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC008065.1-201ENST00000428525 348 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC091862.1-201ENST00000438016 1100 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RPL23AP43-201ENST00000446445 471 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 VN1R34P-201ENST00000447387 883 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC093392.2-201ENST00000450682 337 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 snoU109.1-201ENST00000459339 135 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RPS27AP17-201ENST00000463344 455 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RPL37P6-202ENST00000464216 403 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 TXNP6-201ENST00000510190 310 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC091133.4-201ENST00000511142 308 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AF131216.2-201ENST00000512316 564 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 RN7SKP298-201ENST00000515950 94 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 MTND4LP18-201ENST00000526864 291 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 OR5BC1P-201ENST00000529327 739 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC135001.1-201ENST00000544546 283 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms