Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC140076.1-201ENST00000449897 361 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 SNRPGP6-201ENST00000451124 220 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 snoU109.1-201ENST00000459339 135 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC130509.1-201ENST00000464158 433 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 NDUFB4P2-201ENST00000509515 391 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 GMPSP1-201ENST00000514075 579 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 RNU7-30P-201ENST00000516835 62 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC007991.1-201ENST00000522680 631 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC022878.1-201ENST00000530684 149 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC093027.1-201ENST00000546698 429 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL365434.2-201ENST00000607979 234 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL133215.3-201ENST00000609801 448 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL590282.1-201ENST00000610379 1136 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AL442067.1-201ENST00000613261 223 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 FP236240.3-201ENST00000623061 327 ntBASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NOTCH3Q9UM47 AC139769.1-204ENST00000472297 1931 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC106871.1-201ENST00000568324 3102 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 MTND5P3-201ENST00000438536 1800 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 RNU6-185P-201ENST00000384421 107 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 PEX12P1-201ENST00000400284 1048 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AL359643.1-201ENST00000404109 423 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC068533.1-201ENST00000418542 415 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 NCOR1P3-201ENST00000420479 303 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 RPL21P91-201ENST00000429231 479 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 RPL7P54-201ENST00000438336 674 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 YWHAQP9-201ENST00000445891 512 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 RNU6-1046P-201ENST00000516538 107 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 TRMT10BP1-201ENST00000519377 943 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AP002748.2-201ENST00000528671 348 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 OR7K1P-201ENST00000546439 926 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC004817.2-201ENST00000561794 651 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC093249.1-201ENST00000567049 203 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC137800.2-201ENST00000574375 120 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 HMGB2P1-201ENST00000591146 634 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AL162413.1-201ENST00000603198 110 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 RNU6-88P-201ENST00000606801 100 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AP000238.1-201ENST00000608759 426 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC090425.1-201ENST00000610007 140 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC003985.2-201ENST00000562268 1669 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AC017007.4-201ENST00000503353 1352 ntBASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.17□□□□□ -1.9
NOTCH3Q9UM47 OR4A15-201ENST00000314706 1035 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 RNU6-574P-201ENST00000384265 107 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 SNRPEP2-201ENST00000397592 279 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 RPS24P12-201ENST00000402084 394 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 BTF3P9-201ENST00000418784 283 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MTCO2P5-201ENST00000422621 426 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 NOTCH2P1-201ENST00000443481 624 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC006480.1-201ENST00000449887 378 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 RPL7P31-201ENST00000450192 724 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AC233279.1-201ENST00000455300 423 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL583843.1-201ENST00000456070 346 ntBASIC3.16□□□□□ -1.9
NOTCH3Q9UM47 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms