Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.3□□□□□ -1.4
SHROOM4Q9ULL8 AC090897.3-201ENST00000636973 1157 ntBASIC6.3□□□□□ -1.4
SHROOM4Q9ULL8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM4Q9ULL8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHROOM4Q9ULL8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 RNU6-216P-201ENST00000363282 104 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 SNORA7.4-201ENST00000384249 137 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 MIR708-201ENST00000390708 88 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 AL391417.1-201ENST00000404100 426 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 RNA5SP239-201ENST00000410218 129 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 HMGN1P24-201ENST00000412282 298 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 AL161449.1-201ENST00000414531 1199 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 FCF1P3-201ENST00000496394 590 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 AC022882.1-201ENST00000532142 501 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 AL389895.1-201ENST00000554127 252 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 AL132657.2-201ENST00000564417 358 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 AC023158.2-201ENST00000614876 543 ntBASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.29□□□□□ -1.4
SHROOM4Q9ULL8 RNU6-906P-201ENST00000384700 70 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 FTH1P6-201ENST00000430768 320 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 MTND2P5-201ENST00000432656 1006 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 SETP5-201ENST00000437270 562 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC114322.1-201ENST00000506771 926 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC004987.4-201ENST00000603383 338 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC100793.4-201ENST00000613683 429 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC091046.2-201ENST00000620775 665 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AL078595.3-201ENST00000623815 1166 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 BCLAF1P1-201ENST00000505813 2752 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 MTCO1P14-201ENST00000441695 1559 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 CDR1-202ENST00000625883 1485 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 MTCYBP11-201ENST00000447254 1109 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC093767.1-201ENST00000504523 156 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC008127.2-201ENST00000549925 1075 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC090616.5-202ENST00000582111 297 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC020914.4-201ENST00000597690 277 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC090116.1-201ENST00000615679 446 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC007998.5-201ENST00000622938 237 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AC092184.1-201ENST00000625042 715 ntBASIC6.28□□□□□ -1.4
SHROOM4Q9ULL8 AL513302.2-201ENST00000562313 1842 ntBASIC6.27□□□□□ -1.4
SHROOM4Q9ULL8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 GDI2P1-201ENST00000429312 1336 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AL133412.1-201ENST00000380194 2992 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 RNU6-374P-201ENST00000364146 108 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AC092757.1-201ENST00000467293 467 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 VN1R104P-201ENST00000505115 1009 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AL050303.3-201ENST00000613704 284 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AC008083.4-201ENST00000615076 444 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AC109809.1-201ENST00000619665 545 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AP003485.2-201ENST00000623636 610 ntBASIC6.27□□□□□ -1.41
SHROOM4Q9ULL8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AC062016.1-201ENST00000355719 319 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 RNU4-92P-201ENST00000363783 136 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 ERHP2-201ENST00000402323 299 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 VN1R10P-201ENST00000447106 875 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 RPS4XP2-201ENST00000458402 793 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 RNU6-237P-201ENST00000515985 71 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 MTND2P32-201ENST00000521584 1038 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AP002404.1-201ENST00000532005 451 ntBASIC6.26□□□□□ -1.41
SHROOM4Q9ULL8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms