Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC009318.4-201ENST00000620496 486 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 AC104985.3-201ENST00000623479 597 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 CR381572.1-201ENST00000625098 102 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 ZNF833P-201ENST00000424938 1494 ntBASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLCF1Q9UBD9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC092326.2-201ENST00000624772 1561 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 SNORA51.2-201ENST00000364595 132 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 SNORA51.6-201ENST00000384151 125 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 MIR620-201ENST00000385232 95 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 SNORD65.1-201ENST00000390889 71 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AL583834.1-201ENST00000406943 343 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RNU2-37P-201ENST00000410695 177 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 Z92545.1-201ENST00000411782 234 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 FNDC3CP-201ENST00000420795 1155 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RPL31P12-201ENST00000422587 358 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC091390.3-201ENST00000426478 338 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 GTF2IP3-201ENST00000433887 494 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC127537.2-201ENST00000439258 465 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC093155.1-201ENST00000440164 826 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC079776.3-201ENST00000450665 370 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 ELOCP23-201ENST00000452014 332 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 PNPLA4P1-201ENST00000458328 305 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 PABPC1P3-201ENST00000469174 459 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 SNRPGP3-201ENST00000469405 227 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC087312.1-201ENST00000471411 480 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RPS29P2-201ENST00000479278 136 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RPS3AP43-201ENST00000479743 781 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RPL23AP44-201ENST00000482216 473 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC108078.3-201ENST00000502633 489 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC093767.1-201ENST00000504523 156 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC093752.1-206ENST00000511823 336 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 NDUFB9P3-201ENST00000521269 501 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AL139174.1-201ENST00000531489 886 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC090502.2-201ENST00000549267 280 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC012182.1-201ENST00000570133 895 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 MIR4325-201ENST00000583049 90 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC096947.1-201ENST00000603233 470 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AL158050.2-201ENST00000605336 568 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC008083.4-201ENST00000615076 444 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC138932.5-201ENST00000617759 563 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 OR1S1-201ENST00000624470 978 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 MIR4278-201ENST00000636094 69 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 AC138915.3-201ENST00000562908 1389 ntBASIC2.87□□□□□ -1.95
CLCF1Q9UBD9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 RNU6-989P-201ENST00000362756 107 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 SNORD82-201ENST00000365530 70 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 RNU6-1181P-201ENST00000384191 106 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 MIR128-1-201ENST00000384921 82 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 RNU2-28P-201ENST00000410457 189 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 BX890604.2-201ENST00000427883 474 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 GTF2IP7-202ENST00000436677 309 ntBASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCF1Q9UBD9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms