Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RNU6-516P-201ENST00000411381 104 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL160275.2-201ENST00000412010 394 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 RPL21P108-201ENST00000413857 481 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC009237.10-201ENST00000414112 510 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 RPEP2-201ENST00000432149 701 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 VDAC1P3-201ENST00000434069 851 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC090774.1-201ENST00000435925 246 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 PGBD4P3-201ENST00000440731 581 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 SSXP1-201ENST00000453640 473 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 SNORD42A-201ENST00000459584 64 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 RPS27AP17-201ENST00000463344 455 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 CBX3P3-201ENST00000508108 532 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 RNU2-58P-201ENST00000516403 183 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 RNA5SP309-201ENST00000516670 106 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC022616.6-201ENST00000520479 119 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL356432.3-201ENST00000568952 465 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 RPL23AP87-202ENST00000573039 466 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC005771.1-201ENST00000585581 349 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 IPO5P1-202ENST00000600039 287 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC007687.1-201ENST00000602704 304 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 BPIFA4P-203ENST00000603168 689 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL049634.3-201ENST00000604968 457 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL451086.1-201ENST00000605596 223 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC012443.1-201ENST00000605605 231 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC122108.2-201ENST00000611946 526 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL355810.1-201ENST00000614629 552 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AL450472.3-201ENST00000615578 367 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC004825.2-201ENST00000616634 455 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC108479.2-201ENST00000617314 601 ntBASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
LRFN1Q9P244 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LRFN1Q9P244 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC012020.1-201ENST00000624541 1728 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 RNU1-83P-201ENST00000363426 164 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 RNU6-173P-201ENST00000364215 104 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 RNU4-24P-201ENST00000364565 139 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 SNORA48.7-201ENST00000391302 135 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 CCNG1P1-201ENST00000406783 885 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AL353706.1-201ENST00000436728 494 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 MTCO1P19-201ENST00000443487 500 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 USP9YP29-201ENST00000445112 563 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 MTCO2P7-201ENST00000446518 666 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 FGF7P3-201ENST00000454645 303 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 MTCO1P35-201ENST00000515270 228 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 Y_RNA.655-201ENST00000515919 96 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 RNU6-798P-201ENST00000516912 103 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AP003467.2-201ENST00000520175 319 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 SNRPGP16-201ENST00000533275 226 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC007224.1-201ENST00000564410 144 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC091178.1-203ENST00000584586 279 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.09□□□□□ -1.75
LRFN1Q9P244 BNIP3P8-201ENST00000597863 560 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC090181.2-201ENST00000602975 672 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC011468.4-201ENST00000603942 409 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC067959.1-201ENST00000604334 379 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 ARF4P1-201ENST00000605447 541 ntBASIC4.09□□□□□ -1.75
LRFN1Q9P244 AC008966.2-201ENST00000606157 453 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms