Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 MIR422A-201ENST00000362286 90 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL592148.1-201ENST00000413568 445 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC005005.2-201ENST00000420779 380 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL606495.1-201ENST00000422100 813 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL512649.1-201ENST00000428997 581 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 UBE2V1P6-201ENST00000430840 422 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 RPL23AP83-201ENST00000434984 473 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL136380.1-201ENST00000447970 162 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 Z99714.1-201ENST00000450463 807 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AP002345.1-201ENST00000456493 928 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC117394.1-201ENST00000477323 567 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 FAM172BP-201ENST00000487497 1089 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 RN7SL504P-201ENST00000494496 287 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 RN7SKP31-201ENST00000516354 278 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 HMGB1P46-201ENST00000520062 610 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC008083.2-201ENST00000546707 476 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL049874.4-201ENST00000557593 255 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC090897.2-201ENST00000581715 130 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC024941.1-201ENST00000612250 334 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL162373.1-201ENST00000620433 407 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 MFSD8-245ENST00000641743 948 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 AC016717.2-201ENST00000609089 5141 ntBASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 MIR9-1-201ENST00000385198 89 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 RNA5SP489-201ENST00000410986 109 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL591719.1-201ENST00000444669 744 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 PSPHP1-201ENST00000450062 261 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL031183.1-201ENST00000457667 207 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 RPS4XP10-201ENST00000465034 731 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 RPL30P11-201ENST00000495304 339 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 ERHP1-201ENST00000523006 310 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL391156.1-201ENST00000554965 554 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AL121594.4-201ENST00000556211 1196 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 LRRC37A5P-203ENST00000580181 585 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 AC124312.4-201ENST00000605533 310 ntBASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SMCO4Q9NRQ5 SNORA18.3-201ENST00000384122 132 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 MIR17-201ENST00000385012 84 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC010301.1-201ENST00000473936 355 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 RPL23AP41-201ENST00000484754 458 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC026436.1-201ENST00000510537 270 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC006499.2-201ENST00000513470 337 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC023632.4-201ENST00000517783 191 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AL049838.1-201ENST00000563647 981 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 ELOCP35-201ENST00000604289 336 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AL590282.1-201ENST00000610379 1136 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC104307.1-201ENST00000616142 196 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.68□□□□□ -2.14
SMCO4Q9NRQ5 AC008432.1-201ENST00000615912 1320 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 AC026951.1-201ENST00000559530 2459 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 SNORA38.1-201ENST00000364172 131 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 SNORA62.3-201ENST00000365110 153 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 MIR200C-201ENST00000384980 68 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 MIR27B-201ENST00000385129 97 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 KRR1P1-201ENST00000419430 803 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 HMGN2P19-201ENST00000425149 265 ntBASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.67□□□□□ -2.14
SMCO4Q9NRQ5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms